RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 KIR2DS3Q14952 304 aa19.03■□□□□ 0.64
SREBF1-216ENST00000490796 DNAJC21Q5F1R6 531 aaKnown RBP19.03■□□□□ 0.64
SREBF1-216ENST00000490796 AARS2Q5JTZ9 985 aaKnown RBP19.03■□□□□ 0.64
SREBF1-216ENST00000490796 TLDC1Q6P9B6 456 aa19.03■□□□□ 0.64
SREBF1-216ENST00000490796 CFAP61Q8NHU2 1237 aa19.03■□□□□ 0.64
SREBF1-216ENST00000490796 GSDMBQ8TAX9 411 aa19.03■□□□□ 0.64
SREBF1-216ENST00000490796 PROKR1Q8TCW9 393 aa19.03■□□□□ 0.64
SREBF1-216ENST00000490796 ASZ1Q8WWH4 475 aa19.03■□□□□ 0.64
SREBF1-216ENST00000490796 NDC1Q9BTX1 674 aa19.03■□□□□ 0.64
SREBF1-216ENST00000490796 AP1M1Q9BXS5 423 aa19.03■□□□□ 0.64
SREBF1-216ENST00000490796 MFRPQ9BY79 579 aa19.03■□□□□ 0.64
SREBF1-216ENST00000490796 SPRTNQ9H040 489 aaPredicted RBP19.03■□□□□ 0.64
SREBF1-216ENST00000490796 RAB6BQ9NRW1 208 aa19.03■□□□□ 0.64
SREBF1-216ENST00000490796 PTRH2Q9Y3E5 179 aaKnown RBP19.03■□□□□ 0.64
SREBF1-216ENST00000490796 CLEC18AA5D8T8 446 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 BHMG1C9JSJ3 638 aaPredicted RBP19.02■□□□□ 0.64
SREBF1-216ENST00000490796 LIASO43766 372 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 CEACAM4O75871 244 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 AGFG2O95081 481 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 IGHEP01854 428 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 CBSLP0DN79 551 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 GNLYP22749 145 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 CBSP35520 551 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 SSPNQ14714 243 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 TMED2Q15363 201 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 SLC5A12Q1EHB4 618 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 FHL5Q5TD97 284 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 RHBDD2Q6NTF9 364 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 CLEC18BQ6UXF7 455 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 RNF10Q8N5U6 811 aaKnown RBP19.02■□□□□ 0.64
SREBF1-216ENST00000490796 ZNF655Q8N720 491 aaPredicted RBP19.02■□□□□ 0.64
SREBF1-216ENST00000490796 GLIS1Q8NBF1 620 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 CLEC1AQ8NC01 280 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 CLEC18CQ8NCF0 446 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 PPHLN1Q8NEY8 458 aaKnown RBP19.02■□□□□ 0.64
SREBF1-216ENST00000490796 OR13J1Q8NGT2 312 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 FER1L6-AS2Q96M78 137 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 RANBP9Q96S59 729 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 CHRNA10Q9GZZ6 450 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.02■□□□□ 0.64
SREBF1-216ENST00000490796 SLC2A6Q9UGQ3 507 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 RIMKLBQ9ULI2 386 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 PLCL2Q9UPR0 1127 aa19.02■□□□□ 0.64
SREBF1-216ENST00000490796 BLACEA4D250 179 aa19.01■□□□□ 0.63
SREBF1-216ENST00000490796 KLHL41O60662 606 aa19.01■□□□□ 0.63
SREBF1-216ENST00000490796 SUN1O94901 812 aa19.01■□□□□ 0.63
SREBF1-216ENST00000490796 APOA4P06727 396 aa19.01■□□□□ 0.63
SREBF1-216ENST00000490796 APRTP07741 180 aa19.01■□□□□ 0.63
SREBF1-216ENST00000490796 VARSP26640 1264 aaKnown RBP19.01■□□□□ 0.63
SREBF1-216ENST00000490796 RAB28P51157 221 aa19.01■□□□□ 0.63
SREBF1-216ENST00000490796 SNX1Q13596 522 aa19.01■□□□□ 0.63
SREBF1-216ENST00000490796 RAPSNQ13702 412 aa19.01■□□□□ 0.63
SREBF1-216ENST00000490796 ZIC1Q15915 447 aa19.01■□□□□ 0.63
SREBF1-216ENST00000490796 JMJD6Q6NYC1 403 aaPredicted RBP19.01■□□□□ 0.63
SREBF1-216ENST00000490796 TTC23LQ6PF05 361 aa19.01■□□□□ 0.63
SREBF1-216ENST00000490796 SPC24Q8NBT2 197 aa19.01■□□□□ 0.63
SREBF1-216ENST00000490796 UBE2Q2Q8WVN8 375 aa19.01■□□□□ 0.63
SREBF1-216ENST00000490796 C1orf54Q8WWF1 131 aa19.01■□□□□ 0.63
SREBF1-216ENST00000490796 SLC22A18Q96BI1 424 aa19.01■□□□□ 0.63
SREBF1-216ENST00000490796 NUDT9Q9BW91 350 aa19.01■□□□□ 0.63
SREBF1-216ENST00000490796 SLC29A3Q9BZD2 475 aa19.01■□□□□ 0.63
SREBF1-216ENST00000490796 TSGA10Q9BZW7 698 aa19.01■□□□□ 0.63
SREBF1-216ENST00000490796 INTS7Q9NVH2 962 aaKnown RBP19.01■□□□□ 0.63
SREBF1-216ENST00000490796 DHCR7Q9UBM7 475 aaKnown RBP19.01■□□□□ 0.63
SREBF1-216ENST00000490796 TCAF1Q9Y4C2 921 aa19.01■□□□□ 0.63
SREBF1-216ENST00000490796 MAP4K5Q9Y4K4 846 aa19.01■□□□□ 0.63
SREBF1-216ENST00000490796 CAPN6Q9Y6Q1 641 aa19.01■□□□□ 0.63
SREBF1-216ENST00000490796 PRRC2CQ9Y520 2896 aaKnown RBP19.01■□□□□ 0.63
SREBF1-216ENST00000490796 ESPL1Q14674 2120 aa19■□□□□ 0.63
SREBF1-216ENST00000490796 A0A0U1RQJ8 604 aa19■□□□□ 0.63
SREBF1-216ENST00000490796 ALPPP05187 535 aa19■□□□□ 0.63
SREBF1-216ENST00000490796 ALAS2P22557 587 aa19■□□□□ 0.63
SREBF1-216ENST00000490796 CCR7P32248 378 aa19■□□□□ 0.63
SREBF1-216ENST00000490796 UQCRFS1P47985 274 aa19■□□□□ 0.63
SREBF1-216ENST00000490796 SLC9A5Q14940 896 aa19■□□□□ 0.63
SREBF1-216ENST00000490796 OASLQ15646 514 aaKnown RBP19■□□□□ 0.63
SREBF1-216ENST00000490796 ZNF385CQ66K41 422 aaPredicted RBP19■□□□□ 0.63
SREBF1-216ENST00000490796 MRGPREQ86SM8 312 aa19■□□□□ 0.63
SREBF1-216ENST00000490796 SLC13A5Q86YT5 568 aaPredicted RBP19■□□□□ 0.63
SREBF1-216ENST00000490796 TMEM139Q8IV31 216 aa19■□□□□ 0.63
SREBF1-216ENST00000490796 SLC22A15Q8IZD6 547 aa19■□□□□ 0.63
SREBF1-216ENST00000490796 DENND1AQ8TEH3 1009 aa19■□□□□ 0.63
SREBF1-216ENST00000490796 DLG3Q92796 817 aa19■□□□□ 0.63
SREBF1-216ENST00000490796 GBP5Q96PP8 586 aa19■□□□□ 0.63
SREBF1-216ENST00000490796 CARD6Q9BX69 1037 aa19■□□□□ 0.63
SREBF1-216ENST00000490796 CATSPERZQ9NTU4 200 aa19■□□□□ 0.63
SREBF1-216ENST00000490796 LUZP4Q9P127 313 aa19■□□□□ 0.63
SREBF1-216ENST00000490796 PAK5Q9P286 719 aa19■□□□□ 0.63
SREBF1-216ENST00000490796 SLC39A10Q9ULF5 831 aa19■□□□□ 0.63
SREBF1-216ENST00000490796 GUCA1BQ9UMX6 200 aa19■□□□□ 0.63
SREBF1-216ENST00000490796 KRT86O43790 486 aa18.99■□□□□ 0.63
SREBF1-216ENST00000490796 KLF7O75840 302 aaPredicted RBP18.99■□□□□ 0.63
SREBF1-216ENST00000490796 SORBS2O94875 1100 aaKnown RBP18.99■□□□□ 0.63
SREBF1-216ENST00000490796 PKLRP30613 574 aa18.99■□□□□ 0.63
SREBF1-216ENST00000490796 GRIA1P42261 906 aa18.99■□□□□ 0.63
SREBF1-216ENST00000490796 INPP5JQ15735 1006 aaPredicted RBP18.99■□□□□ 0.63
SREBF1-216ENST00000490796 CYP2A13Q16696 494 aa18.99■□□□□ 0.63
SREBF1-216ENST00000490796 NKAIN1Q4KMZ8 207 aa18.99■□□□□ 0.63
SREBF1-216ENST00000490796 VWA5B1Q5TIE3 1220 aa18.99■□□□□ 0.63
SREBF1-216ENST00000490796 PTRHD1Q6GMV3 140 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms