RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 TMEM209Q96SK2 561 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 TBC1D14Q9P2M4 693 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 COLEC10Q9Y6Z7 277 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 MYO5BQ9ULV0 1848 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 DLX3O60479 287 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 S100GP29377 79 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 CLCN4P51793 760 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 PRR5P85299 388 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 CAMK1Q14012 370 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 HEPACAMQ14CZ8 416 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 TIGD5Q53EQ6 642 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 HID1Q8IV36 788 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 OR4C6Q8NH72 309 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 HEPHQ9BQS7 1158 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 KCNN2Q9H2S1 579 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 ZNF282Q9UDV7 671 aaPredicted RBP17.28■□□□□ 0.36
NPHP4-209ENST00000489180 PCDHGA3Q9Y5H0 932 aa17.28■□□□□ 0.36
NPHP4-209ENST00000489180 SPIN1Q9Y657 262 aaPredicted RBP17.28■□□□□ 0.36
NPHP4-209ENST00000489180 DCLK1O15075 740 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 PCDH7O60245 1069 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 SCGNO76038 276 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 PAPSS2O95340 614 aaPredicted RBP17.27■□□□□ 0.36
NPHP4-209ENST00000489180 IFI30P13284 250 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 CSKP41240 450 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 SIRPB2Q5JXA9 342 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 KIAA1161Q6NSJ0 714 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 PPP1R14BQ96C90 147 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 PHF24Q9UPV7 400 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 ZNF541Q9H0D2 1346 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 AQP12BA6NM10 295 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 PRKD3O94806 890 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 FESP07332 822 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 GGT5P36269 586 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 HERC3Q15034 1050 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 IQCHQ86VS3 1027 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 AQP12AQ8IXF9 295 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 OR9I1Q8NGQ6 314 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 GAL3ST4Q96RP7 486 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 OR2AG1Q9H205 316 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 ABCB8Q9NUT2 735 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 MTRRQ9UBK8 725 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 MSRAQ9UJ68 235 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 PCDHGA11Q9Y5H2 935 aa17.27■□□□□ 0.36
NPHP4-209ENST00000489180 CLPXO76031 633 aa17.27■□□□□ 0.35
NPHP4-209ENST00000489180 IL7RP16871 459 aa17.27■□□□□ 0.35
NPHP4-209ENST00000489180 TIE1P35590 1138 aa17.27■□□□□ 0.35
NPHP4-209ENST00000489180 FAM110CQ1W6H9 321 aa17.27■□□□□ 0.35
NPHP4-209ENST00000489180 MINDY4Q4G0A6 757 aa17.27■□□□□ 0.35
NPHP4-209ENST00000489180 ARMCX6Q7L4S7 300 aa17.27■□□□□ 0.35
NPHP4-209ENST00000489180 KCT2Q8NC54 265 aa17.27■□□□□ 0.35
NPHP4-209ENST00000489180 SRFBP1Q8NEF9 429 aaKnown RBP17.27■□□□□ 0.35
NPHP4-209ENST00000489180 LCN9Q8WX39 176 aa17.27■□□□□ 0.35
NPHP4-209ENST00000489180 SLCO2A1Q92959 643 aa17.27■□□□□ 0.35
NPHP4-209ENST00000489180 TMEM203Q969S6 136 aa17.27■□□□□ 0.35
NPHP4-209ENST00000489180 PLD4Q96BZ4 506 aa17.27■□□□□ 0.35
NPHP4-209ENST00000489180 IL4I1Q96RQ9 567 aa17.27■□□□□ 0.35
NPHP4-209ENST00000489180 NTPCRQ9BSD7 190 aaKnown RBP17.27■□□□□ 0.35
NPHP4-209ENST00000489180 LIN28AQ9H9Z2 209 aaKnown RBP17.27■□□□□ 0.35
NPHP4-209ENST00000489180 TAS2R7Q9NYW3 318 aa17.27■□□□□ 0.35
NPHP4-209ENST00000489180 PPEF2O14830 753 aa17.27■□□□□ 0.35
NPHP4-209ENST00000489180 HCRTO43612 131 aa17.27■□□□□ 0.35
NPHP4-209ENST00000489180 ORC5O43913 435 aa17.27■□□□□ 0.35
NPHP4-209ENST00000489180 LAG3P18627 525 aa17.27■□□□□ 0.35
NPHP4-209ENST00000489180 MAT2AP31153 395 aaKnown RBP17.27■□□□□ 0.35
NPHP4-209ENST00000489180 RPS24P62847 133 aaKnown RBP17.27■□□□□ 0.35
NPHP4-209ENST00000489180 KLHL35Q6PF15 583 aa17.27■□□□□ 0.35
NPHP4-209ENST00000489180 KLK6Q92876 244 aa17.27■□□□□ 0.35
NPHP4-209ENST00000489180 ZNF347Q96SE7 839 aa17.27■□□□□ 0.35
NPHP4-209ENST00000489180 POLR2J3Q9H1A7 115 aaKnown RBP17.27■□□□□ 0.35
NPHP4-209ENST00000489180 MRC1P22897 1456 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 ENGP17813 658 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 ARHGDIBP52566 201 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 PEX5LQ8IYB4 626 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 GPR135Q8IZ08 494 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 OR2L5Q8NG80 312 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 TMEM59LQ9UK28 342 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 FZD4Q9ULV1 537 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 A0A1W2PQ72 361 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 NCBP2P52298 156 aaKnown RBP eCLIP17.26■□□□□ 0.35
NPHP4-209ENST00000489180 PCBP2Q15366 365 aaKnown RBP eCLIP17.26■□□□□ 0.351e-8■■■■■ 46
NPHP4-209ENST00000489180 ZNF311Q5JNZ3 666 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 RBM20Q5T481 1227 aaKnown RBP17.26■□□□□ 0.35
NPHP4-209ENST00000489180 OR4F3Q6IEY1 312 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 ULK3Q6PHR2 472 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 ERI1Q8IV48 349 aaKnown RBP17.26■□□□□ 0.35
NPHP4-209ENST00000489180 CPA6Q8N4T0 437 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 CMASQ8NFW8 434 aaPredicted RBP17.26■□□□□ 0.35
NPHP4-209ENST00000489180 STON2Q8WXE9 905 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 TMCO6Q96DC7 493 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 EIF3KQ9UBQ5 218 aaKnown RBP17.26■□□□□ 0.35
NPHP4-209ENST00000489180 GPN3Q9UHW5 284 aaPredicted RBP17.26■□□□□ 0.35
NPHP4-209ENST00000489180 J3QRK9 145 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 SYN3O14994 580 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 MTX2O75431 263 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 AHSGP02765 367 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 DDX6P26196 483 aaKnown RBP eCLIP17.26■□□□□ 0.35
NPHP4-209ENST00000489180 UFM1P61960 85 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 HFE2Q6ZVN8 426 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 FBXL8Q96CD0 374 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 DUS2Q9NX74 493 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms