RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 OR8D1Q8WZ84 308 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 DNASE1L2Q92874 299 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 VPS39Q96JC1 886 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 SLC25A23Q9BV35 468 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 WDR12Q9GZL7 423 aaKnown RBP13.42□□□□□ -0.26
COPS7B-221ENST00000488111 C8orf33Q9H7E9 229 aaPredicted RBP13.42□□□□□ -0.26
COPS7B-221ENST00000488111 MAGEE1Q9HCI5 957 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 AKIP1Q9NQ31 210 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 POLR3BQ9NW08 1133 aaPredicted RBP13.42□□□□□ -0.26
COPS7B-221ENST00000488111 SMPD3Q9NY59 655 aaPredicted RBP13.42□□□□□ -0.26
COPS7B-221ENST00000488111 ANKMY1Q9P2S6 941 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 OAZ3Q9UMX2 235 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 NOX1Q9Y5S8 564 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 LOC730098B7Z3J9 87 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 NRP2O60462 931 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 PAPSS2O95340 614 aaPredicted RBP13.42□□□□□ -0.26
COPS7B-221ENST00000488111 PRSS56P0CW18 603 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 LPOP22079 712 aaPredicted RBP13.42□□□□□ -0.26
COPS7B-221ENST00000488111 IL10P22301 178 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 TGM1P22735 817 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 YAP1P46937 504 aaKnown RBP13.42□□□□□ -0.26
COPS7B-221ENST00000488111 ZNF140P52738 457 aaPredicted RBP13.42□□□□□ -0.26
COPS7B-221ENST00000488111 ATP6V0D1P61421 351 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 ADARB1P78563 741 aaKnown RBP13.42□□□□□ -0.26
COPS7B-221ENST00000488111 UGP2Q16851 508 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 TMEM196Q5HYL7 178 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 XAF1Q6GPH4 301 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 KIAA0930Q6ICG6 404 aaPredicted RBP13.42□□□□□ -0.26
COPS7B-221ENST00000488111 CHST15Q7LFX5 561 aaPredicted RBP13.42□□□□□ -0.26
COPS7B-221ENST00000488111 SNX31Q8N9S9 440 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 SCRN2Q96FV2 425 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 CDKN2AIPNLQ96HQ2 116 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 DHRS1Q96LJ7 313 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 TSNARE1Q96NA8 513 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 GPR22Q99680 433 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 ZFYVE1Q9HBF4 777 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 HMG20AQ9NP66 347 aa13.42□□□□□ -0.26
COPS7B-221ENST00000488111 RBMX2Q9Y388 322 aaKnown RBP13.42□□□□□ -0.26
COPS7B-221ENST00000488111 ATG2BQ96BY7 2078 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 SHISA7A6NL88 538 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 C16orf96A6NNT2 1141 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 EI24O14681 340 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 STX7O15400 261 aaKnown RBP13.41□□□□□ -0.26
COPS7B-221ENST00000488111 KCNH1O95259 989 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 SRFP11831 508 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 HNRNPLP14866 589 aaKnown RBP eCLIP13.41□□□□□ -0.26
COPS7B-221ENST00000488111 TIMP2P16035 220 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 PCYT1AP49585 367 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 NEK2P51955 445 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 ELAVL3Q14576 367 aaKnown RBP13.41□□□□□ -0.26
COPS7B-221ENST00000488111 CDKN3Q16667 212 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 ZNF805Q5CZA5 627 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 LCN8Q6JVE9 175 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 CRTC1Q6UUV9 634 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 ARMCX6Q7L4S7 300 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 ANKRD13BQ86YJ7 626 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 PARP8Q8N3A8 854 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 FSTL5Q8N475 847 aaPredicted RBP13.41□□□□□ -0.26
COPS7B-221ENST00000488111 SCYL1Q96KG9 808 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 KLHL25Q9H0H3 589 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 EHD1Q9H4M9 534 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 MEAF6Q9HAF1 191 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 CCDC167Q9P0B6 97 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 B4GALT6Q9UBX8 382 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 FKBPLQ9UIM3 349 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 TLK1Q9UKI8 766 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 SLC39A10Q9ULF5 831 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 AURKCQ9UQB9 309 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 FAM50BQ9Y247 325 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 VWA7Q9Y334 891 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 TRIOO75962 3097 aa13.41□□□□□ -0.26
COPS7B-221ENST00000488111 UBDO15205 165 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 RPP40O75818 363 aaKnown RBP13.4□□□□□ -0.26
COPS7B-221ENST00000488111 GOT2P00505 430 aaKnown RBP13.4□□□□□ -0.26
COPS7B-221ENST00000488111 PRNPP04156 253 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 LHCGRP22888 699 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 PSMA4P25789 261 aaKnown RBP13.4□□□□□ -0.26
COPS7B-221ENST00000488111 SELENBP1Q13228 472 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 PERM1Q5SV97 790 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 BROXQ5VW32 411 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 LRRC66Q68CR7 880 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 ZNF470Q6ECI4 717 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 KIAA1211LQ6NV74 962 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 BRAT1Q6PJG6 821 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 LAYNQ6UX15 382 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 LINC00299Q6ZSB3 139 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 TPRG1Q6ZUI0 275 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 PARS2Q7L3T8 475 aaKnown RBP13.4□□□□□ -0.26
COPS7B-221ENST00000488111 ADGRG5Q8IZF4 528 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 FAM3CQ92520 227 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 ROPN1LQ96C74 230 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 NRBF2Q96F24 287 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 NLE1Q9NVX2 485 aaPredicted RBP13.4□□□□□ -0.26
COPS7B-221ENST00000488111 MARCH4Q9P2E8 410 aaPredicted RBP13.4□□□□□ -0.26
COPS7B-221ENST00000488111 ABCD2Q9UBJ2 740 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 NDRG2Q9UN36 371 aaKnown RBP13.4□□□□□ -0.26
COPS7B-221ENST00000488111 RUVBL2Q9Y230 463 aaKnown RBP13.4□□□□□ -0.26
COPS7B-221ENST00000488111 ST14Q9Y5Y6 855 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 GPR39O43194 453 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 XPAP23025 273 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms