RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 RWDD1Q9H446 243 aaPredicted RBP3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 TSPY26PQ9H489 355 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 TFB2MQ9H5Q4 396 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 ERVMER34-1Q9H9K5 563 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 APOBEC3GQ9HC16 384 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 PIH1D3Q9NQM4 214 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 CCDC177Q9NQR7 707 aaPredicted RBP3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 MRGBPQ9NV56 204 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 NPAP1Q9NZP6 1156 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 STK26Q9P289 416 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 RHCGQ9UBD6 479 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 SPIN1Q9Y657 262 aaPredicted RBP3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 FGD5Q6ZNL6 1462 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 ELP1O95163 1332 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 KDM5DQ9BY66 1539 aa3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 GREB1LQ9C091 1923 aaPredicted RBP3.64□□□□□ -1.83
ECHDC1-217ENST00000488087 PCF11O94913 1555 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 KIF21AQ7Z4S6 1674 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 TEX13DA0A0J9YY54 714 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 A0A1W2PPI3 338 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 MED19A0JLT2 244 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 ELOVL7A1L3X0 281 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 TMCO5BA8MYB1 307 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 XRCC3O43542 346 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 TSPAN1O60635 241 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 CREG1O75629 220 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 GGPS1O95749 300 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 CBLP22681 906 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 MAP2K2P36507 400 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 CDK3Q00526 305 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 KIR2DS3Q14952 304 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 CDC37Q16543 378 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 CBWD6Q4V339 395 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 CBWD3Q5JTY5 395 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 FIGLAQ6QHK4 219 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 C19orf48Q6RUI8 117 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 SYT10Q6XYQ8 523 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 CHST3Q7LGC8 479 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 SMIM29Q86T20 159 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 TMEM173Q86WV6 379 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 SNX32Q86XE0 403 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 FAM114A1Q8IWE2 563 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 ZNF713Q8N859 430 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 TDRD5Q8NAT2 981 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 PAPD5Q8NDF8 572 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 CCDC112Q8NEF3 446 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 ANKRD20A12PQ8NF67 263 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 OR2AJ1Q8NGZ0 328 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 TAS1R2Q8TE23 839 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 ARSGQ96EG1 525 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 SCRN2Q96FV2 425 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 CFAP57Q96MR6 1250 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 C16orf70Q9BSU1 422 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 ZNF334Q9HCZ1 680 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 OLFML3Q9NRN5 406 aa3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.63□□□□□ -1.83
ECHDC1-217ENST00000488087 PIK3C2GO75747 1445 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 PTPRGP23470 1445 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 ATP10AO60312 1499 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 EHBP1L1Q8N3D4 1523 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 A8MXE2 369 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 PRR23D1E9PI22 279 aaPredicted RBP3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 NEMFO60524 1076 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 SLC22A3O75751 556 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 CAVIN2O95810 425 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 PRSS1P07477 247 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 TPM1P09493 284 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 PRR23D2P0DMB1 279 aaPredicted RBP3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 ACP2P11117 423 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 GNAZP19086 355 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 KRTAP5-9P26371 169 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 EPHA2P29317 976 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 CCR3P51677 355 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 RAD23AP54725 363 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 CSE1LP55060 971 aaKnown RBP3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 CDH13P55290 713 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 SARNPP82979 210 aaKnown RBP3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 MFAP5Q13361 173 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 ZSCAN26Q16670 478 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 CCNYL2Q5T2Q4 361 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 CST9LP1Q5W188 147 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 DENND5BQ6ZUT9 1274 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 CCDC186Q7Z3E2 898 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 CUZD1Q86UP6 607 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 ADIPOR2Q86V24 386 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 DCUN1D3Q8IWE4 304 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 GPALPP1Q8IXQ4 340 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 EFCAB13Q8IY85 973 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 CRYBG2Q8N1P7 616 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 TC2NQ8N9U0 490 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 L3MBTL4Q8NA19 623 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 EXD1Q8NHP7 514 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 ZNF473Q8WTR7 871 aaKnown RBP3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 RMDN1Q96DB5 314 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 C17orf77Q96MU5 243 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 MS4A10Q96PG2 267 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 PSD2Q9BQI7 771 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 TRAF4Q9BUZ4 470 aaPredicted RBP3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 ABHD6Q9BV23 337 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 DPAGT1Q9H3H5 408 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms