RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 CACNG1Q06432 222 aa7.34□□□□□ -1.23
PDPN-205ENST00000487038 RPA4Q13156 261 aa7.34□□□□□ -1.23
PDPN-205ENST00000487038 PDK1Q15118 436 aa7.34□□□□□ -1.23
PDPN-205ENST00000487038 C3AR1Q16581 482 aa7.34□□□□□ -1.23
PDPN-205ENST00000487038 CNSTQ6PJW8 725 aa7.34□□□□□ -1.23
PDPN-205ENST00000487038 TAOK1Q7L7X3 1001 aa7.34□□□□□ -1.23
PDPN-205ENST00000487038 NLRP9Q7RTR0 991 aa7.34□□□□□ -1.23
PDPN-205ENST00000487038 DAAM2Q86T65 1068 aa7.34□□□□□ -1.23
PDPN-205ENST00000487038 TRIM73Q86UV7 250 aa7.34□□□□□ -1.23
PDPN-205ENST00000487038 TMEM200AQ86VY9 491 aa7.34□□□□□ -1.23
PDPN-205ENST00000487038 TGIF2LYQ8IUE0 185 aa7.34□□□□□ -1.23
PDPN-205ENST00000487038 ZNF398Q8TD17 642 aa7.34□□□□□ -1.23
PDPN-205ENST00000487038 BRIX1Q8TDN6 353 aaKnown RBP7.34□□□□□ -1.23
PDPN-205ENST00000487038 PHF10Q8WUB8 498 aaKnown RBP7.34□□□□□ -1.23
PDPN-205ENST00000487038 HEXDCQ8WVB3 486 aa7.34□□□□□ -1.23
PDPN-205ENST00000487038 TADA1Q96BN2 335 aa7.34□□□□□ -1.23
PDPN-205ENST00000487038 ULK4Q96C45 1275 aa7.34□□□□□ -1.23
PDPN-205ENST00000487038 FAF2Q96CS3 445 aa7.34□□□□□ -1.23
PDPN-205ENST00000487038 RNF32Q9H0A6 362 aa7.34□□□□□ -1.23
PDPN-205ENST00000487038 ASB8Q9H765 288 aa7.34□□□□□ -1.23
PDPN-205ENST00000487038 COG4Q9H9E3 785 aa7.34□□□□□ -1.23
PDPN-205ENST00000487038 CRLS1Q9UJA2 301 aa7.34□□□□□ -1.23
PDPN-205ENST00000487038 MEMO1Q9Y316 297 aa7.34□□□□□ -1.23
PDPN-205ENST00000487038 HEY1Q9Y5J3 304 aa7.34□□□□□ -1.23
PDPN-205ENST00000487038 OR5H15A6NDH6 313 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 PRAMEF2O60811 474 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 WFS1O76024 890 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 BMP10O95393 424 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 ONECUT2O95948 504 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 CHRM5P08912 532 aaPredicted RBP7.33□□□□□ -1.24
PDPN-205ENST00000487038 GSTM1P09488 218 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 PRR35P0CG20 571 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 ABOP16442 354 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 CXCR2P25025 360 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 MST1P26927 711 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 SOX11P35716 441 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 TMPRSS15P98073 1019 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 GSTM4Q03013 218 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 KLHL30Q0D2K2 578 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 PRKG2Q13237 762 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 BOP1Q14137 746 aaKnown RBP7.33□□□□□ -1.24
PDPN-205ENST00000487038 GRM7Q14831 915 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 KRTCAP3Q53RY4 240 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 ZC3H12BQ5HYM0 836 aaKnown RBP7.33□□□□□ -1.24
PDPN-205ENST00000487038 TCTE1Q5JU00 501 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 HIBCHQ6NVY1 386 aaPredicted RBP7.33□□□□□ -1.24
PDPN-205ENST00000487038 Q6ZPB1 254 aaPredicted RBP7.33□□□□□ -1.24
PDPN-205ENST00000487038 RIPOR1Q6ZS17 1223 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 SHISA6Q6ZSJ9 500 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 NDUFAF7Q7L592 441 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 ZNF571Q7Z3V5 609 aaPredicted RBP7.33□□□□□ -1.24
PDPN-205ENST00000487038 FAM20CQ8IXL6 584 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 SIRT6Q8N6T7 355 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 SPATA22Q8NHS9 363 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 THAP3Q8WTV1 239 aaPredicted RBP7.33□□□□□ -1.24
PDPN-205ENST00000487038 TFGQ92734 400 aaPredicted RBP7.33□□□□□ -1.24
PDPN-205ENST00000487038 NINJ1Q92982 152 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 MIEF2Q96C03 454 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 BTBD6Q96KE9 485 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 OR2A14Q96R47 310 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 FOXC2Q99958 501 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 FSD1LQ9BXM9 530 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 ISCUQ9H1K1 167 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 NUP62CLQ9H1M0 184 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 OR52A5Q9H2C5 316 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 XKR8Q9H6D3 395 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 GLOD4Q9HC38 313 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 SLC24A3Q9HC58 644 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 SLC22A11Q9NSA0 550 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 CUTCQ9NTM9 273 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 INTS7Q9NVH2 962 aaKnown RBP7.33□□□□□ -1.24
PDPN-205ENST00000487038 RIC8BQ9NVN3 520 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 EURLQ9NYK6 297 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 PLA2G3Q9NZ20 509 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 OR6C2Q9NZP2 312 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 CTSFQ9UBX1 484 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 LIMA1Q9UHB6 759 aaKnown RBP7.33□□□□□ -1.24
PDPN-205ENST00000487038 FAM153AQ9UHL3 310 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 POLG2Q9UHN1 485 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 LCMT1Q9UIC8 334 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 TEKT2Q9UIF3 430 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 ICKQ9UPZ9 632 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 PCDHGB6Q9Y5F9 930 aa7.33□□□□□ -1.24
PDPN-205ENST00000487038 LOC285095A0A1B0GVY8 99 aa7.32□□□□□ -1.24
PDPN-205ENST00000487038 C2orf81A6NN90 581 aa7.32□□□□□ -1.24
PDPN-205ENST00000487038 ISM1B1AKI9 464 aa7.32□□□□□ -1.24
PDPN-205ENST00000487038 FAM227AF5H4B4 570 aa7.32□□□□□ -1.24
PDPN-205ENST00000487038 DDX3XO00571 662 aaKnown RBP eCLIP7.32□□□□□ -1.24
PDPN-205ENST00000487038 GAPDHSO14556 408 aaPredicted RBP7.32□□□□□ -1.24
PDPN-205ENST00000487038 APOL1O14791 398 aa7.32□□□□□ -1.24
PDPN-205ENST00000487038 HCRTR1O43613 425 aa7.32□□□□□ -1.24
PDPN-205ENST00000487038 SRP72O76094 671 aaKnown RBP7.32□□□□□ -1.24
PDPN-205ENST00000487038 ZRANB2O95218 330 aaKnown RBP eCLIP7.32□□□□□ -1.24
PDPN-205ENST00000487038 TSPAN12O95859 305 aa7.32□□□□□ -1.24
PDPN-205ENST00000487038 WDPCPO95876 746 aa7.32□□□□□ -1.24
PDPN-205ENST00000487038 F10P00742 488 aa7.32□□□□□ -1.24
PDPN-205ENST00000487038 EPOP01588 193 aa7.32□□□□□ -1.24
PDPN-205ENST00000487038 SERPINA7P05543 415 aa7.32□□□□□ -1.24
PDPN-205ENST00000487038 ATP1B2P14415 290 aaPredicted RBP7.32□□□□□ -1.24
PDPN-205ENST00000487038 ZFXP17010 805 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms