RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 ATG16L1Q676U5 607 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 SULT1C3Q6IMI6 304 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 ABRAXAS1Q6UWZ7 409 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 PIWIL4Q7Z3Z4 852 aaKnown RBP6.78□□□□□ -1.32
UBR4-214ENST00000486515 C11orf96Q7Z7L8 435 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 SPATS2Q86XZ4 545 aaKnown RBP6.78□□□□□ -1.32
UBR4-214ENST00000486515 NUDCD3Q8IVD9 361 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 SYTL1Q8IYJ3 562 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 FBXO39Q8N4B4 442 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 MINDY1Q8N5J2 469 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 BANPQ8N9N5 519 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 ARMC2Q8NEN0 867 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 ACVR1CQ8NER5 493 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 OR5K2Q8NHB8 316 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 C1orf216Q8TAB5 229 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 LKAAEAR1Q8TD35 194 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 MGARPQ8TDB4 240 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 ANKRD49Q8WVL7 239 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 ZFPM2Q8WW38 1151 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 ATP6V1E2Q96A05 226 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 KIAA1191Q96A73 305 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 SLC22A18Q96BI1 424 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 UBXN10Q96LJ8 280 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 CCDC138Q96M89 665 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 FAM111AQ96PZ2 611 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 SLC38A3Q99624 504 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 LRRC61Q9BV99 259 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 SLC12A9Q9BXP2 914 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 UNKQ9C0B0 810 aaKnown RBP6.78□□□□□ -1.32
UBR4-214ENST00000486515 SRMSQ9H3Y6 488 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 PRDM8Q9NQV8 689 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 GPR27Q9NS67 375 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 TM7SF3Q9NS93 570 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 POT1Q9NUX5 634 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 INTS9Q9NV88 658 aaKnown RBP6.78□□□□□ -1.32
UBR4-214ENST00000486515 MKS1Q9NXB0 559 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 UTP6Q9NYH9 597 aaKnown RBP6.78□□□□□ -1.32
UBR4-214ENST00000486515 NLGN3Q9NZ94 848 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 WWOXQ9NZC7 414 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 NUDT4Q9NZJ9 180 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 SIRPGQ9P1W8 387 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 XPR1Q9UBH6 696 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 SLC23A2Q9UGH3 650 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 STK38LQ9Y2H1 464 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 PLLPQ9Y342 182 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 MSRB2Q9Y3D2 182 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 OARD1Q9Y530 152 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 CFAP20Q9Y6A4 193 aaKnown RBP6.78□□□□□ -1.32
UBR4-214ENST00000486515 CACNA1IQ9P0X4 2223 aa6.78□□□□□ -1.32
UBR4-214ENST00000486515 LRRK1Q38SD2 2015 aa6.77□□□□□ -1.32
UBR4-214ENST00000486515 TRBV23OR9-2A0A075B6M9 112 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 HMX2A2RU54 273 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 C10orf142B7Z368 130 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 PYCARD-AS1I3L0S3 204 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 CLGNO14967 610 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 YY2O15391 372 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 SGTAO43765 313 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 KATNA1O75449 491 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 PSIP1O75475 530 aaKnown RBP6.77□□□□□ -1.33
UBR4-214ENST00000486515 CRCPO75575 148 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 IPO13O94829 963 aaKnown RBP6.77□□□□□ -1.33
UBR4-214ENST00000486515 MATN4O95460 622 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 MTHFD1P11586 935 aaKnown RBP6.77□□□□□ -1.33
UBR4-214ENST00000486515 AMD1P17707 334 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 ATP5F1P24539 256 aaPredicted RBP6.77□□□□□ -1.33
UBR4-214ENST00000486515 EPHA8P29322 1005 aaPredicted RBP6.77□□□□□ -1.33
UBR4-214ENST00000486515 SHMT2P34897 504 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 RPA3P35244 121 aaPredicted RBP6.77□□□□□ -1.33
UBR4-214ENST00000486515 GRK6P43250 576 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 MAGEA12P43365 314 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 PIK3CGP48736 1102 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 SLC18A1P54219 525 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 ALDH18A1P54886 795 aaKnown RBP6.77□□□□□ -1.33
UBR4-214ENST00000486515 CDKL1Q00532 357 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 PRKG2Q13237 762 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 SLC14A1Q13336 389 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 NAA25Q14CX7 972 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 NR0B2Q15466 257 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 TGFBIQ15582 683 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 TSNQ15631 228 aaKnown RBP6.77□□□□□ -1.33
UBR4-214ENST00000486515 RPE65Q16518 533 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 PFKFB4Q16877 469 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 ZNF423Q2M1K9 1284 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 TTMPQ5BVD1 217 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 CDKL4Q5MAI5 379 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 TPRG1LQ5T0D9 272 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 ZCCHC8Q6NZY4 707 aaKnown RBP6.77□□□□□ -1.33
UBR4-214ENST00000486515 IYDQ6PHW0 289 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 OOSP2Q86WS3 158 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 KIRREL3Q8IZU9 778 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 AFAP1L2Q8N4X5 818 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 TBC1D19Q8N5T2 526 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 ARL10Q8N8L6 244 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 OR9A1PQ8NGU1 263 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 OR10G6Q8NH81 332 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 CCL4L1Q8NHW4 92 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 LRRC8CQ8TDW0 803 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 SETD7Q8WTS6 366 aaKnown RBP6.77□□□□□ -1.33
UBR4-214ENST00000486515 MZB1Q8WU39 189 aa6.77□□□□□ -1.33
UBR4-214ENST00000486515 LCN9Q8WX39 176 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms