RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 TCAIMQ8N3R3 496 aa12.19□□□□□ -0.46
TRAPPC12-218ENST00000479897 OR52E1Q8NGJ3 308 aa12.19□□□□□ -0.46
TRAPPC12-218ENST00000479897 OR9A1PQ8NGU1 263 aa12.19□□□□□ -0.46
TRAPPC12-218ENST00000479897 BAHD1Q8TBE0 780 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC12-218ENST00000479897 DENND1AQ8TEH3 1009 aa12.19□□□□□ -0.46
TRAPPC12-218ENST00000479897 ATL1Q8WXF7 558 aa12.19□□□□□ -0.46
TRAPPC12-218ENST00000479897 FBXL8Q96CD0 374 aa12.19□□□□□ -0.46
TRAPPC12-218ENST00000479897 SCYL1Q96KG9 808 aa12.19□□□□□ -0.46
TRAPPC12-218ENST00000479897 HIST1H2AHQ96KK5 128 aa12.19□□□□□ -0.46
TRAPPC12-218ENST00000479897 FAM111AQ96PZ2 611 aa12.19□□□□□ -0.46
TRAPPC12-218ENST00000479897 FERD3LQ96RJ6 166 aa12.19□□□□□ -0.46
TRAPPC12-218ENST00000479897 HIST1H2AJQ99878 128 aa12.19□□□□□ -0.46
TRAPPC12-218ENST00000479897 H2AFJQ9BTM1 129 aa12.19□□□□□ -0.46
TRAPPC12-218ENST00000479897 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC12-218ENST00000479897 RXFP3Q9NSD7 469 aa12.19□□□□□ -0.46
TRAPPC12-218ENST00000479897 U3KQA8 63 aa12.19□□□□□ -0.46
TRAPPC12-218ENST00000479897 GVINP1Q7Z2Y8 2422 aa12.19□□□□□ -0.46
TRAPPC12-218ENST00000479897 FRYLO94915 3013 aa12.19□□□□□ -0.46
TRAPPC12-218ENST00000479897 RIF1Q5UIP0 2472 aaKnown RBP12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 ZNF839A8K0R7 811 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 G3V2L1 256 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 STX16-NPEPL1H3BU86 382 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 STX16O14662 325 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 SIGLEC6O43699 453 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 IPO13O94829 963 aaKnown RBP12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 ANXA5P08758 320 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 TPBGLP0DKB5 382 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 CD59P13987 128 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 PNLIPP16233 465 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 GLB1P16278 677 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 TAC1P20366 129 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 NR1D1P20393 614 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 IMPA1P29218 277 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 SHMT2P34897 504 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 RPA3P35244 121 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 GGT5P36269 586 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 RAB28P51157 221 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 LIMK1P53667 647 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 ALDH18A1P54886 795 aaKnown RBP12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 MPP2Q14168 576 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 GPR18Q14330 331 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 PCLAFQ15004 111 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 CYP2A13Q16696 494 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 CCSMST1Q4G0I0 132 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 SULT1C3Q6IMI6 304 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 METTL2BQ6P1Q9 378 aaKnown RBP12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 C16orf46Q6P387 395 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 ZYG11AQ6WRX3 759 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 ASCL5Q7RTU5 278 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 KLHDC8AQ8IYD2 350 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 RAB42Q8N4Z0 105 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 NAT6Q93015 286 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 RHBDF1Q96CC6 855 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 CCDC126Q96EE4 140 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 APOLD1Q96LR9 279 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 PKP4Q99569 1192 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 EPB41L1Q9H4G0 881 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 EVA1BQ9NVM1 165 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 ARL15Q9NXU5 204 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 SIRPGQ9P1W8 387 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 STOX2Q9P2F5 926 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 CPSF2Q9P2I0 782 aaKnown RBP12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 SLC17A7Q9P2U7 560 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 COPG2Q9UBF2 871 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 PTBP2Q9UKA9 531 aaKnown RBP12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 ICKQ9UPZ9 632 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 ZNF292O60281 2723 aa12.18□□□□□ -0.46
TRAPPC12-218ENST00000479897 EME2A4GXA9 379 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 A8MT66 165 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 SUPT3HB4E1H0 165 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 UBXN8O00124 270 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 PPM1DO15297 605 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 SMIM24O75264 130 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 SUPT3HO75486 399 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 SLC16A8O95907 504 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 S100BP04271 92 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 CKMT1AP12532 417 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 ATP5F1P24539 256 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 GPR3P46089 330 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 SLC6A12P48065 614 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 PPP2R2AP63151 447 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 KRT33BQ14525 404 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 SETDB1Q15047 1291 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 NR0B2Q15466 257 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 ANKS6Q68DC2 871 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 MBOAT1Q6ZNC8 495 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 SLC22A9Q8IVM8 553 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 LRRC56Q8IYG6 542 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 FBXO39Q8N4B4 442 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 EID2Q8N6I1 236 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 ARMC2Q8NEN0 867 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 OR2L8Q8NGY9 312 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 ZNF480Q8WV37 535 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 PHOX2BQ99453 314 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 C1QTNF3Q9BXJ4 246 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 C12orf65Q9H3J6 166 aaKnown RBP12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 CNOT10Q9H9A5 744 aaKnown RBP12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 KCNK9Q9NPC2 374 aa12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 UTP6Q9NYH9 597 aaKnown RBP12.17□□□□□ -0.46
TRAPPC12-218ENST00000479897 NKIRAS1Q9NYS0 192 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms