RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 UGT1A6P19224 532 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 UGT1A1P22309 533 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 PSMA2P25787 234 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 CHRNB4P30926 498 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 MTIF2P46199 727 aaKnown RBP7□□□□□ -1.29
SPTLC1-205ENST00000477888 ZNF165P49910 485 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 ARSFP54793 590 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 HSF1Q00613 529 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 ALDH6A1Q02252 535 aaKnown RBP7□□□□□ -1.29
SPTLC1-205ENST00000477888 KLC1Q07866 573 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 MAMLD1Q13495 774 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 KRT33BQ14525 404 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 MAN2A1Q16706 1144 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 DEFB113Q30KQ7 82 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 ZNF766Q5HY98 468 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 RIPOR1Q6ZS17 1223 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 CEP128Q6ZU80 1094 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 TRIM73Q86UV7 250 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 AMIGO1Q86WK6 493 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 CDC20BQ86Y33 519 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 LILRA3Q8N6C8 439 aaPredicted RBP7□□□□□ -1.29
SPTLC1-205ENST00000477888 AMER2Q8N7J2 671 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 ACRBPQ8NEB7 543 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 DDHD1Q8NEL9 900 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 OR52E1Q8NGJ3 308 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 FLVCR1-AS1Q8TAF5 88 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 FATE1Q969F0 183 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 ZNF653Q96CK0 615 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 OR2A14Q96R47 310 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 DEF6Q9H4E7 631 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 UGT1A7Q9HAW7 530 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 UGT1A10Q9HAW8 530 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 UGT1A8Q9HAW9 530 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 IL26Q9NPH9 171 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 ENAMQ9NRM1 1142 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 SAMSN1Q9NSI8 373 aaKnown RBP7□□□□□ -1.29
SPTLC1-205ENST00000477888 LRFN1Q9P244 771 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 RWDD2AQ9UIY3 292 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 HOOK1Q9UJC3 728 aaKnown RBP7□□□□□ -1.29
SPTLC1-205ENST00000477888 PLCL2Q9UPR0 1127 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 RNF6Q9Y252 685 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 ZNF711Q9Y462 761 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 L3MBTL1Q9Y468 752 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 HEBP2Q9Y5Z4 205 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 NSG1A0A0A6YYJ2 146 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 KLHL33A6NCF5 533 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 FAM90A27PA6NNH2 459 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 INAFM1C9JVW0 142 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 TTI1O43156 1089 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 GPR39O43194 453 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 WFS1O76024 890 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 ATE1O95260 518 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 MT-CYBP00156 380 aaPredicted RBP6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 SLC4A1P02730 911 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 POLBP06746 335 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 SLC35G4P0C7Q5 338 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 ITGAMP11215 1152 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 UGT2B7P16662 529 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 DESP17661 470 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 CCNCP24863 283 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 IL1R2P27930 398 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 PBLDP30039 288 aaPredicted RBP6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 SERPINB6P35237 376 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 SOX5P35711 763 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 HMGCLP35914 325 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 ARL4AP40617 200 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 CD86P42081 329 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 NSG1P42857 185 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 OR1D4P47884 311 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 CARSP49589 748 aaKnown RBP6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 DLX5P56178 289 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 JAM2P57087 298 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 GALNT2Q10471 571 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 BECN1Q14457 450 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 TFDP3Q5H9I0 405 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 LDLRAP1Q5SW96 308 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 FNBP1LQ5T0N5 605 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 NAPRTQ6XQN6 538 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 CHSY3Q70JA7 882 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 CCDC71Q8IV32 467 aaPredicted RBP6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 PHC2Q8IXK0 858 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 MCOLN2Q8IZK6 566 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 CLYBLQ8N0X4 340 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 GHDCQ8N2G8 530 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 CPSF7Q8N684 471 aaKnown RBP6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 STT3BQ8TCJ2 826 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 DENND1AQ8TEH3 1009 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 DLG3Q92796 817 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 COX4I2Q96KJ9 171 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 LINC00615Q96LM1 132 aaPredicted RBP6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 FRMD6Q96NE9 622 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 TSGA13Q96PP4 275 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 FERD3LQ96RJ6 166 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 GPATCH1Q9BRR8 931 aaKnown RBP6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 CCM2Q9BSQ5 444 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 CRB3Q9BUF7 120 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 GPR63Q9BZJ6 419 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 TRIM7Q9C029 511 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 ZCCHC2Q9C0B9 1178 aaKnown RBP6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 XKR8Q9H6D3 395 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms