RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 RNASEH2BQ5TBB1 312 aaKnown RBP5.65□□□□□ -1.5
SMC5-203ENST00000475540 PWWP2BQ6NUJ5 590 aa5.65□□□□□ -1.5
SMC5-203ENST00000475540 PIGZQ86VD9 579 aa5.65□□□□□ -1.5
SMC5-203ENST00000475540 LSMEM2Q8N112 164 aa5.65□□□□□ -1.5
SMC5-203ENST00000475540 OR2T6Q8NHC8 308 aa5.65□□□□□ -1.5
SMC5-203ENST00000475540 SPACA9Q96E40 222 aaPredicted RBP5.65□□□□□ -1.5
SMC5-203ENST00000475540 OLFM1Q99784 485 aa5.65□□□□□ -1.5
SMC5-203ENST00000475540 NUP85Q9BW27 656 aa5.65□□□□□ -1.5
SMC5-203ENST00000475540 WNT5BQ9H1J7 359 aa5.65□□□□□ -1.5
SMC5-203ENST00000475540 P2RY12Q9H244 342 aa5.65□□□□□ -1.5
SMC5-203ENST00000475540 SERINC1Q9NRX5 453 aa5.65□□□□□ -1.5
SMC5-203ENST00000475540 DPP3Q9NY33 737 aa5.65□□□□□ -1.5
SMC5-203ENST00000475540 BARHL2Q9NY43 387 aa5.65□□□□□ -1.5
SMC5-203ENST00000475540 CACNG4Q9UBN1 327 aa5.65□□□□□ -1.5
SMC5-203ENST00000475540 PPIEQ9UNP9 301 aaKnown RBP5.65□□□□□ -1.5
SMC5-203ENST00000475540 PRSS21Q9Y6M0 314 aa5.65□□□□□ -1.5
SMC5-203ENST00000475540 A0A0U1RQG5 324 aaPredicted RBP5.64□□□□□ -1.51
SMC5-203ENST00000475540 MEIS2O14770 477 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 OR10H2O60403 315 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 CLK1P49759 484 aaKnown RBP5.64□□□□□ -1.51
SMC5-203ENST00000475540 CDH13P55290 713 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 SNAPC1Q16533 368 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 ITPRIPL2Q3MIP1 535 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 C20orf194Q5TEA3 1177 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 PSRC1Q6PGN9 363 aaPredicted RBP5.64□□□□□ -1.51
SMC5-203ENST00000475540 DNAAF5Q86Y56 855 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 SCML4Q8N228 414 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 MARVELD2Q8N4S9 558 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 SYT2Q8N9I0 419 aaPredicted RBP5.64□□□□□ -1.51
SMC5-203ENST00000475540 OR2T11Q8NH01 316 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 PHLDA1Q8WV24 401 aaPredicted RBP5.64□□□□□ -1.51
SMC5-203ENST00000475540 SLAMF9Q96A28 289 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 PTERQ96BW5 349 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 TMCO6Q96DC7 493 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 ERP27Q96DN0 273 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 POM121L2Q96KW2 1035 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 FNBP1Q96RU3 617 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 MIS12Q9H081 205 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 SLC35C2Q9NQQ7 365 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 FGF21Q9NSA1 209 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 PLCXD1Q9NUJ7 323 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 SPHK1Q9NYA1 384 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 CLIC5Q9NZA1 410 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 KLHL8Q9P2G9 620 aaPredicted RBP5.64□□□□□ -1.51
SMC5-203ENST00000475540 EXOGQ9Y2C4 368 aaKnown RBP5.64□□□□□ -1.51
SMC5-203ENST00000475540 SNX8Q9Y5X2 465 aa5.64□□□□□ -1.51
SMC5-203ENST00000475540 GLOD5A6NK44 160 aa5.63□□□□□ -1.51
SMC5-203ENST00000475540 FIBPO43427 364 aa5.63□□□□□ -1.51
SMC5-203ENST00000475540 TBX6O95947 436 aaPredicted RBP5.63□□□□□ -1.51
SMC5-203ENST00000475540 DNASE1P24855 282 aa5.63□□□□□ -1.51
SMC5-203ENST00000475540 B3GALT5-AS1P59052 145 aa5.63□□□□□ -1.51
SMC5-203ENST00000475540 HNRNPDQ14103 355 aaKnown RBP5.63□□□□□ -1.51
SMC5-203ENST00000475540 CBWD6Q4V339 395 aa5.63□□□□□ -1.51
SMC5-203ENST00000475540 PHLDA2Q53GA4 152 aa5.63□□□□□ -1.51
SMC5-203ENST00000475540 CBWD3Q5JTY5 395 aa5.63□□□□□ -1.51
SMC5-203ENST00000475540 ELFN2Q5R3F8 820 aa5.63□□□□□ -1.51
SMC5-203ENST00000475540 CDK20Q8IZL9 346 aa5.63□□□□□ -1.51
SMC5-203ENST00000475540 NIPA2Q8N8Q9 360 aa5.63□□□□□ -1.51
SMC5-203ENST00000475540 NPEPL1Q8NDH3 523 aa5.63□□□□□ -1.51
SMC5-203ENST00000475540 OR10S1Q8NGN2 331 aa5.63□□□□□ -1.51
SMC5-203ENST00000475540 OR4C3Q8NH37 302 aa5.63□□□□□ -1.51
SMC5-203ENST00000475540 URM1Q9BTM9 101 aaKnown RBP5.63□□□□□ -1.51
SMC5-203ENST00000475540 MXD3Q9BW11 206 aa5.63□□□□□ -1.51
SMC5-203ENST00000475540 EQTNQ9NQ60 294 aa5.63□□□□□ -1.51
SMC5-203ENST00000475540 GDE1Q9NZC3 331 aa5.63□□□□□ -1.51
SMC5-203ENST00000475540 RNF215Q9Y6U7 377 aa5.63□□□□□ -1.51
SMC5-203ENST00000475540 DFFBO76075 338 aa5.62□□□□□ -1.51
SMC5-203ENST00000475540 NKX2-1P43699 371 aaPredicted RBP5.62□□□□□ -1.51
SMC5-203ENST00000475540 STXBP4Q6ZWJ1 553 aa5.62□□□□□ -1.51
SMC5-203ENST00000475540 ADGRA1Q86SQ6 560 aa5.62□□□□□ -1.51
SMC5-203ENST00000475540 NUDT13Q86X67 352 aa5.62□□□□□ -1.51
SMC5-203ENST00000475540 DHX58Q96C10 678 aa5.62□□□□□ -1.51
SMC5-203ENST00000475540 SFXN2Q96NB2 322 aa5.62□□□□□ -1.51
SMC5-203ENST00000475540 CPSF2Q9P2I0 782 aaKnown RBP5.62□□□□□ -1.51
SMC5-203ENST00000475540 LRWD1Q9UFC0 647 aa5.62□□□□□ -1.51
SMC5-203ENST00000475540 RPS6KA6Q9UK32 745 aa5.62□□□□□ -1.51
SMC5-203ENST00000475540 NDUFAF8A1L188 74 aa5.61□□□□□ -1.51
SMC5-203ENST00000475540 HSPA8P11142 646 aaKnown RBP5.61□□□□□ -1.51
SMC5-203ENST00000475540 PFKFB1P16118 471 aa5.61□□□□□ -1.51
SMC5-203ENST00000475540 TYMPP19971 482 aa5.61□□□□□ -1.51
SMC5-203ENST00000475540 COPB2P35606 906 aa5.61□□□□□ -1.51
SMC5-203ENST00000475540 SLC6A12P48065 614 aa5.61□□□□□ -1.51
SMC5-203ENST00000475540 ZNF75DP51815 510 aa5.61□□□□□ -1.51
SMC5-203ENST00000475540 UBXN2AP68543 259 aa5.61□□□□□ -1.51
SMC5-203ENST00000475540 FAAP20Q6NZ36 180 aa5.61□□□□□ -1.51
SMC5-203ENST00000475540 Q6ZSR9 355 aa5.61□□□□□ -1.51
SMC5-203ENST00000475540 EID3Q8N140 333 aa5.61□□□□□ -1.51
SMC5-203ENST00000475540 DBF4BQ8NFT6 615 aa5.61□□□□□ -1.51
SMC5-203ENST00000475540 TSPAN14Q8NG11 270 aa5.61□□□□□ -1.51
SMC5-203ENST00000475540 SSMEM1Q8WWF3 244 aa5.61□□□□□ -1.51
SMC5-203ENST00000475540 DYRK2Q92630 601 aa5.61□□□□□ -1.51
SMC5-203ENST00000475540 GCNAQ96QF7 691 aa5.61□□□□□ -1.51
SMC5-203ENST00000475540 SEPHS2Q99611 448 aa5.61□□□□□ -1.51
SMC5-203ENST00000475540 SYT15Q9BQS2 421 aa5.61□□□□□ -1.51
SMC5-203ENST00000475540 CPVLQ9H3G5 476 aa5.61□□□□□ -1.51
SMC5-203ENST00000475540 TMEM181Q9P2C4 612 aa5.61□□□□□ -1.51
SMC5-203ENST00000475540 CHORDC1Q9UHD1 332 aaPredicted RBP5.61□□□□□ -1.51
SMC5-203ENST00000475540 DAPK2Q9UIK4 370 aa5.61□□□□□ -1.51
SMC5-203ENST00000475540 PCDH11YQ9BZA8 1340 aa5.6□□□□□ -1.51
SMC5-203ENST00000475540 TMEM221A6NGB7 291 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms