RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 CCDC32Q9BV29 185 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 OR2B2Q9GZK3 357 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 DCSTAMPQ9H295 470 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 IL1RAPQ9NPH3 570 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 ACOT13Q9NPJ3 140 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 VAPAQ9P0L0 249 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 KLHL3Q9UH77 587 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 PCDHGA10Q9Y5H3 936 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 FAM172BPA6NC97 362 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 OR6C75A6NL08 312 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 TMX2-CTNND1H3BSU7 103 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 TMEM189-UBE2V1I3L0A0 370 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 CCL22O00626 93 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 SYN3O14994 580 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 KDELR3O43731 214 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 AIREO43918 545 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 MPZL2O60487 215 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 KRT75O95678 551 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 DLGAP3O95886 979 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 GSTT2P0CG29 244 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 GSTT2BP0CG30 244 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 ITGALP20701 1170 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 CTSKP43235 329 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 ALDH9A1P49189 494 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 AGTR2P50052 363 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 RABGGTBP53611 331 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 PTPN5P54829 565 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 SRSF11Q05519 484 aaKnown RBP5.99□□□□□ -1.45
HERC4-209ENST00000473533 MAD2L1BPQ15013 274 aaPredicted RBP5.99□□□□□ -1.45
HERC4-209ENST00000473533 KIAA0040Q15053 153 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 EIF4HQ15056 248 aaKnown RBP5.99□□□□□ -1.45
HERC4-209ENST00000473533 SPANXN2Q5MJ10 180 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 C10orf120Q5SQS8 335 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 LDLRAP1Q5SW96 308 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 KDM4DQ6B0I6 523 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 THOC7Q6I9Y2 204 aaKnown RBP5.99□□□□□ -1.45
HERC4-209ENST00000473533 ZNF544Q6NX49 715 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 LETMD1Q6P1Q0 360 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 ZNF783Q6ZMS7 281 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 GCNT7Q6ZNI0 430 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 PGBD5Q8N414 524 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 LIX1Q8N485 282 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 SIDT2Q8NBJ9 832 aaKnown RBP5.99□□□□□ -1.45
HERC4-209ENST00000473533 C3orf58Q8NDZ4 430 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 FLCNQ8NFG4 579 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 ST13P5Q8NFI4 369 aaPredicted RBP5.99□□□□□ -1.45
HERC4-209ENST00000473533 EEF1AKMT1Q8WVE0 214 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 TMCO6Q96DC7 493 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 SIAEQ9HAT2 523 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 PDFQ9HBH1 243 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 ADPRHL2Q9NX46 363 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 IL37Q9NZH6 218 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 SLAMF8Q9P0V8 285 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 ZNF232Q9UNY5 417 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 GBF1Q92538 1859 aa5.99□□□□□ -1.45
HERC4-209ENST00000473533 LAMA2P24043 3122 aaKnown RBP5.98□□□□□ -1.45
HERC4-209ENST00000473533 DNAH12Q6ZR08 3092 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 SLC12A8A0AV02 714 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 ILVBLA1L0T0 632 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 AGAP5A6NIR3 686 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 A8MVJ9 347 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 NPIPB8E9PQR5 432 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 MUSKO15146 869 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 RFPL2O75678 378 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 EPN2O95208 641 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 ZBTB7AO95365 584 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 TSPAN12O95859 305 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 IGLV3-27P01718 113 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 PRPH2P23942 346 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 ACVR2AP27037 513 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 TIE1P35590 1138 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 MAPK8P45983 427 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 DGKQP52824 942 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 FCGRTP55899 365 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 RIPPLY1Q0D2K3 151 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 RAPSNQ13702 412 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 GTF2H3Q13889 308 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 VEZF1Q14119 521 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 ELOAQ14241 798 aaKnown RBP5.98□□□□□ -1.45
HERC4-209ENST00000473533 ADPRMQ3LIE5 342 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 GGTA1PQ4G0N0 100 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 SLC39A12Q504Y0 691 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 PYCR3Q53H96 274 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 ALFQ53S48 1182 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 C1QTNF12Q5T7M4 302 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 SCIMPQ6UWF3 145 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 AGMOQ6ZNB7 445 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 FAM92BQ6ZTR7 304 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 CHST9Q7L1S5 443 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 DET1Q7L5Y6 550 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 PIWIL3Q7Z3Z3 882 aaKnown RBP5.98□□□□□ -1.45
HERC4-209ENST00000473533 CTU1Q7Z7A3 348 aaKnown RBP5.98□□□□□ -1.45
HERC4-209ENST00000473533 B3GNT8Q7Z7M8 397 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 CPNE9Q8IYJ1 553 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 POC5Q8NA72 575 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 ATG16L2Q8NAA4 619 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 VPS37AQ8NEZ2 397 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 OR10T2Q8NGX3 314 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 PSMA8Q8TAA3 256 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 C2orf15Q8WU43 125 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms