RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 TRPC4APQ8TEL6 797 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 UBTD2Q8WUN7 234 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 DLG3Q92796 817 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 FAR2Q96K12 515 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 MAGEB10Q96LZ2 347 aaPredicted RBP9.5□□□□□ -0.89
CCM2-204ENST00000470837 ZNF317Q96PQ6 595 aaPredicted RBP9.5□□□□□ -0.89
CCM2-204ENST00000470837 CCT8L2Q96SF2 557 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 INSM2Q96T92 566 aaPredicted RBP9.5□□□□□ -0.89
CCM2-204ENST00000470837 PKP4Q99569 1192 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 SIKE1Q9BRV8 207 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 ATG10Q9H0Y0 220 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 SLC32A1Q9H598 525 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 RABEP2Q9H5N1 569 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 ERVMER34-1Q9H9K5 563 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 MID1IP1Q9NPA3 183 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 SLCO1B3Q9NPD5 702 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 SEMA4BQ9NPR2 832 aaPredicted RBP9.5□□□□□ -0.89
CCM2-204ENST00000470837 CCDC177Q9NQR7 707 aaPredicted RBP9.5□□□□□ -0.89
CCM2-204ENST00000470837 ABCF3Q9NUQ8 709 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 DNAJC11Q9NVH1 559 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 SPATA7Q9P0W8 599 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 TAAR2Q9P1P5 351 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 PCTPQ9UKL6 214 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 PCOLCE2Q9UKZ9 415 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 WDR37Q9Y2I8 494 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.5□□□□□ -0.89
CCM2-204ENST00000470837 RAP2CQ9Y3L5 183 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 DYRK1BQ9Y463 629 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 SLCO1B1Q9Y6L6 691 aa9.5□□□□□ -0.89
CCM2-204ENST00000470837 OR52A4PA6NMU1 304 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 PRR33A8MZF0 331 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 HGSO14964 777 aaPredicted RBP9.49□□□□□ -0.89
CCM2-204ENST00000470837 CLGNO14967 610 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 YKT6O15498 198 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 AQP9O43315 295 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 ITM2AO43736 263 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 LYPLA1O75608 230 aaPredicted RBP9.49□□□□□ -0.89
CCM2-204ENST00000470837 TGDSO95455 350 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 SLC16A8O95907 504 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 SYPP08247 313 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 RPS17P08708 135 aaKnown RBP9.49□□□□□ -0.89
CCM2-204ENST00000470837 GGT5P36269 586 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 PPM1FP49593 454 aaPredicted RBP9.49□□□□□ -0.89
CCM2-204ENST00000470837 RPL14P50914 215 aaKnown RBP9.49□□□□□ -0.89
CCM2-204ENST00000470837 PNLIPRP1P54315 467 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 CDH13P55290 713 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 PKNOX1P55347 436 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 OCRLQ01968 901 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 C1orf61Q13536 156 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 NAE1Q13564 534 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 CLCA4Q14CN2 919 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 PLCL1Q15111 1095 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 PTCHD3Q3KNS1 767 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 UNC50Q53HI1 259 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 FBXO48Q5FWF7 155 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 SH2D4BQ5SQS7 431 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 MBOAT1Q6ZNC8 495 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 GPRIN3Q6ZVF9 776 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 EFL1Q7Z2Z2 1120 aaKnown RBP9.49□□□□□ -0.89
CCM2-204ENST00000470837 GOLGA7Q7Z5G4 137 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 CUZD1Q86UP6 607 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 SPATS2Q86XZ4 545 aaKnown RBP9.49□□□□□ -0.89
CCM2-204ENST00000470837 MYLK4Q86YV6 388 aaPredicted RBP9.49□□□□□ -0.89
CCM2-204ENST00000470837 RBM12BQ8IXT5 1001 aaKnown RBP9.49□□□□□ -0.89
CCM2-204ENST00000470837 ZBTB44Q8NCP5 570 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 CCL4L1Q8NHW4 92 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 C1orf216Q8TAB5 229 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 PIWIL2Q8TC59 973 aaKnown RBP9.49□□□□□ -0.89
CCM2-204ENST00000470837 AGR3Q8TD06 166 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 MAPK15Q8TD08 544 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 ZNF483Q8TF39 744 aaPredicted RBP9.49□□□□□ -0.89
CCM2-204ENST00000470837 ZDHHC1Q8WTX9 485 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 ZFPM2Q8WW38 1151 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 LCN9Q8WX39 176 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 SMPDL3AQ92484 453 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 ESAMQ96AP7 390 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 MIPEPQ99797 713 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 ELAC2Q9BQ52 826 aaKnown RBP9.49□□□□□ -0.89
CCM2-204ENST00000470837 PLCD4Q9BRC7 762 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 LRRC61Q9BV99 259 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 C1QTNF3Q9BXJ4 246 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 SHCBP1LQ9BZQ2 653 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 PCBD2Q9H0N5 130 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 TCEAL2Q9H3H9 227 aaPredicted RBP9.49□□□□□ -0.89
CCM2-204ENST00000470837 IPPKQ9H8X2 491 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 NPHS2Q9NP85 383 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 POT1Q9NUX5 634 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 STOX2Q9P2F5 926 aaPredicted RBP9.49□□□□□ -0.89
CCM2-204ENST00000470837 VTI1BQ9UEU0 232 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 MARCOQ9UEW3 520 aaPredicted RBP9.49□□□□□ -0.89
CCM2-204ENST00000470837 PILRBQ9UKJ0 227 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 KCNE2Q9Y6J6 123 aa9.49□□□□□ -0.89
CCM2-204ENST00000470837 TECTAO75443 2155 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 TRBV23OR9-2A0A075B6M9 112 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 TRPC5OSA6NMA1 111 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 B4DGG1 531 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 E2F3O00716 465 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 TAPBPO15533 448 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 GPR37L1O60883 481 aa9.48□□□□□ -0.89
CCM2-204ENST00000470837 ALPPL2P10696 532 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms