RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 SPRTNQ9H040 489 aaPredicted RBP16.87■□□□□ 0.29
COL7A1-208ENST00000470076 ETNK1Q9HBU6 452 aa16.87■□□□□ 0.29
COL7A1-208ENST00000470076 IMPACTQ9P2X3 320 aa16.87■□□□□ 0.29
COL7A1-208ENST00000470076 GPN3Q9UHW5 284 aaPredicted RBP16.87■□□□□ 0.29
COL7A1-208ENST00000470076 SRPK3Q9UPE1 567 aa16.87■□□□□ 0.29
COL7A1-208ENST00000470076 A6NL46 340 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 ISM1B1AKI9 464 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 E7EVH7 732 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 ZSCAN9O15535 394 aaPredicted RBP16.86■□□□□ 0.29
COL7A1-208ENST00000470076 HCRTR1O43613 425 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 LIASO43766 372 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 OR1I1O60431 355 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 GOT2P00505 430 aaKnown RBP16.86■□□□□ 0.29
COL7A1-208ENST00000470076 IGHEP01854 428 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 CBSLP0DN79 551 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 GNLYP22749 145 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 VARSP26640 1264 aaKnown RBP16.86■□□□□ 0.29
COL7A1-208ENST00000470076 OTX2P32243 289 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 CBSP35520 551 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 UQCRFS1P47985 274 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 DCDP81605 110 aaKnown RBP16.86■□□□□ 0.29
COL7A1-208ENST00000470076 SSPNQ14714 243 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 SEL1L2Q5TEA6 688 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 MLIPQ5VWP3 458 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 TLDC1Q6P9B6 456 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 MRGPREQ86SM8 312 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 SLC22A15Q8IZD6 547 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 RNF10Q8N5U6 811 aaKnown RBP16.86■□□□□ 0.29
COL7A1-208ENST00000470076 OR4L1Q8NH43 312 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 UBE2Q2Q8WVN8 375 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 PEX13Q92968 403 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 GBP5Q96PP8 586 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 SMAD5Q99717 465 aaKnown RBP16.86■□□□□ 0.29
COL7A1-208ENST00000470076 DESI2Q9BSY9 194 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 AP1M1Q9BXS5 423 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 SLAMF7Q9NQ25 335 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 TXLNGQ9NUQ3 528 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 SLC2A6Q9UGQ3 507 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 PLCL2Q9UPR0 1127 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 CAPN6Q9Y6Q1 641 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 ICE1Q9Y2F5 2266 aa16.86■□□□□ 0.29
COL7A1-208ENST00000470076 A0A0U1RQJ8 604 aa16.85■□□□□ 0.29
COL7A1-208ENST00000470076 BLACEA4D250 179 aa16.85■□□□□ 0.29
COL7A1-208ENST00000470076 IFNB1P01574 187 aa16.85■□□□□ 0.29
COL7A1-208ENST00000470076 RPN2P04844 631 aa16.85■□□□□ 0.29
COL7A1-208ENST00000470076 FOLR3P41439 243 aa16.85■□□□□ 0.29
COL7A1-208ENST00000470076 RAB28P51157 221 aa16.85■□□□□ 0.29
COL7A1-208ENST00000470076 PRAMEP78395 509 aa16.85■□□□□ 0.29
COL7A1-208ENST00000470076 INPP5JQ15735 1006 aaPredicted RBP16.85■□□□□ 0.29
COL7A1-208ENST00000470076 FASTKD1Q53R41 847 aaKnown RBP16.85■□□□□ 0.29
COL7A1-208ENST00000470076 FHL5Q5TD97 284 aa16.85■□□□□ 0.29
COL7A1-208ENST00000470076 C1orf189Q5VU69 101 aa16.85■□□□□ 0.29
COL7A1-208ENST00000470076 DNAJC22Q8N4W6 341 aa16.85■□□□□ 0.29
COL7A1-208ENST00000470076 OR6P1Q8NGX9 317 aa16.85■□□□□ 0.29
COL7A1-208ENST00000470076 ASZ1Q8WWH4 475 aa16.85■□□□□ 0.29
COL7A1-208ENST00000470076 PNPLA2Q96AD5 504 aa16.85■□□□□ 0.29
COL7A1-208ENST00000470076 FER1L6-AS2Q96M78 137 aa16.85■□□□□ 0.29
COL7A1-208ENST00000470076 NDC1Q9BTX1 674 aa16.85■□□□□ 0.29
COL7A1-208ENST00000470076 CARD6Q9BX69 1037 aa16.85■□□□□ 0.29
COL7A1-208ENST00000470076 LRRC4CQ9HCJ2 640 aa16.85■□□□□ 0.29
COL7A1-208ENST00000470076 CASS4Q9NQ75 786 aa16.85■□□□□ 0.29
COL7A1-208ENST00000470076 C5AR2Q9P296 337 aa16.85■□□□□ 0.29
COL7A1-208ENST00000470076 IFT80Q9P2H3 777 aaPredicted RBP16.85■□□□□ 0.29
COL7A1-208ENST00000470076 NDOR1Q9UHB4 597 aa16.85■□□□□ 0.29
COL7A1-208ENST00000470076 PLAGL1Q9UM63 463 aa16.85■□□□□ 0.29
COL7A1-208ENST00000470076 ZNF148Q9UQR1 794 aa16.85■□□□□ 0.29
COL7A1-208ENST00000470076 PTRH2Q9Y3E5 179 aaKnown RBP16.85■□□□□ 0.29
COL7A1-208ENST00000470076 PCSK5Q92824 1860 aa16.84■□□□□ 0.29
COL7A1-208ENST00000470076 PEX12O00623 359 aa16.84■□□□□ 0.29
COL7A1-208ENST00000470076 KLHL41O60662 606 aa16.84■□□□□ 0.29
COL7A1-208ENST00000470076 PEBP1P30086 187 aaKnown RBP16.84■□□□□ 0.29
COL7A1-208ENST00000470076 PKLRP30613 574 aa16.84■□□□□ 0.29
COL7A1-208ENST00000470076 CCR7P32248 378 aa16.84■□□□□ 0.29
COL7A1-208ENST00000470076 GRIA1P42261 906 aa16.84■□□□□ 0.29
COL7A1-208ENST00000470076 CSE1LP55060 971 aaKnown RBP16.84■□□□□ 0.29
COL7A1-208ENST00000470076 HSPA14Q0VDF9 509 aa16.84■□□□□ 0.29
COL7A1-208ENST00000470076 KYNUQ16719 465 aa16.84■□□□□ 0.29
COL7A1-208ENST00000470076 AARS2Q5JTZ9 985 aaKnown RBP16.84■□□□□ 0.29
COL7A1-208ENST00000470076 VWA5B1Q5TIE3 1220 aa16.84■□□□□ 0.29
COL7A1-208ENST00000470076 SLC6A19Q695T7 634 aa16.84■□□□□ 0.29
COL7A1-208ENST00000470076 ZNF534Q76KX8 674 aa16.84■□□□□ 0.29
COL7A1-208ENST00000470076 ZNF655Q8N720 491 aaPredicted RBP16.84■□□□□ 0.29
COL7A1-208ENST00000470076 RBMXL3Q8N7X1 1067 aaKnown RBP16.84■□□□□ 0.29
COL7A1-208ENST00000470076 Q8NA96 180 aa16.84■□□□□ 0.29
COL7A1-208ENST00000470076 CLEC1AQ8NC01 280 aa16.84■□□□□ 0.29
COL7A1-208ENST00000470076 OR2Y1Q8NGV0 311 aa16.84■□□□□ 0.29
COL7A1-208ENST00000470076 SLC22A18Q96BI1 424 aa16.84■□□□□ 0.29
COL7A1-208ENST00000470076 ZNF778Q96MU6 729 aa16.84■□□□□ 0.29
COL7A1-208ENST00000470076 RAB6BQ9NRW1 208 aa16.84■□□□□ 0.29
COL7A1-208ENST00000470076 IRAK4Q9NWZ3 460 aa16.84■□□□□ 0.29
COL7A1-208ENST00000470076 DHCR7Q9UBM7 475 aaKnown RBP16.84■□□□□ 0.29
COL7A1-208ENST00000470076 ANAPC5Q9UJX4 755 aa16.84■□□□□ 0.29
COL7A1-208ENST00000470076 CDYLQ9Y232 598 aa16.84■□□□□ 0.29
COL7A1-208ENST00000470076 TCAF1Q9Y4C2 921 aa16.84■□□□□ 0.29
COL7A1-208ENST00000470076 GPC4O75487 556 aa16.83■□□□□ 0.28
COL7A1-208ENST00000470076 AGFG2O95081 481 aa16.83■□□□□ 0.28
COL7A1-208ENST00000470076 APOA4P06727 396 aa16.83■□□□□ 0.28
COL7A1-208ENST00000470076 APRTP07741 180 aa16.83■□□□□ 0.28
COL7A1-208ENST00000470076 CD9P21926 228 aa16.83■□□□□ 0.28
COL7A1-208ENST00000470076 NKAIN1Q4KMZ8 207 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms