RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 ITGAMP11215 1152 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 EPB42P16452 691 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 BPIP17213 487 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 ITGB6P18564 788 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 ITIH1P19827 911 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 PCMT1P22061 227 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 CBSP35520 551 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 GGT5P36269 586 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 MEP1AQ16819 746 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 RFX4Q33E94 735 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 GPR33Q49SQ1 333 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 GGTA1PQ4G0N0 100 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 ANKRD34AQ69YU3 496 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 FAM43BQ6ZT52 329 aaPredicted RBP13.34□□□□□ -0.27
BRCA1-209ENST00000470026 CLDN19Q8N6F1 224 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 GIPC3Q8TF64 312 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 FAM210AQ96ND0 272 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 EGFL8Q99944 293 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 TSEN34Q9BSV6 310 aaKnown RBP13.34□□□□□ -0.27
BRCA1-209ENST00000470026 LTB4R2Q9NPC1 389 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 B3GNT3Q9Y2A9 372 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 PCDHGB1Q9Y5G3 927 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 KCNE1BA0A087WTH5 132 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.34□□□□□ -0.27
BRCA1-209ENST00000470026 LOC100130705A0A1B0GUX0 176 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 H0Y626 953 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 M0QX08 132 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 WNT9AO14904 365 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 HOXA2O43364 376 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 NOBOXO60393 691 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 STK16O75716 305 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 RECQL5O94762 991 aaPredicted RBP13.34□□□□□ -0.27
BRCA1-209ENST00000470026 TRIM16O95361 564 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 BCL10O95999 233 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 CCDC159P0C7I6 412 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 OR1D2P34982 312 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 CSKP41240 450 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 PTPN5P54829 565 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 KCNC4Q03721 635 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 LAPTM5Q13571 262 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 SLC16A12Q6ZSM3 486 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 HIPK1Q86Z02 1210 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 DCP2Q8IU60 420 aaKnown RBP13.34□□□□□ -0.27
BRCA1-209ENST00000470026 FAM217AQ8IXS0 508 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 EID3Q8N140 333 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 C10orf111Q8N326 155 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 HJURPQ8NCD3 748 aaPredicted RBP13.34□□□□□ -0.27
BRCA1-209ENST00000470026 BPIFB6Q8NFQ5 453 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 REXO5Q96IC2 774 aaKnown RBP13.34□□□□□ -0.27
BRCA1-209ENST00000470026 COX4I2Q96KJ9 171 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 TBCDQ9BTW9 1192 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 APOL5Q9BWW9 433 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 ACPTQ9BZG2 426 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 GABARAPL1Q9H0R8 117 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 ADNPQ9H2P0 1102 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 ZFP14Q9HCL3 533 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 SOBPA7XYQ1 873 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 SLC1A7O00341 560 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 SOCS5O75159 536 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 CLPXO76031 633 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 ABLIM3O94929 683 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 CLDN9O95484 217 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 ACPPP15309 386 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 ACVR2AP27037 513 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 PPP3CCP48454 512 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 MLLT10P55197 1068 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 RPS14P62263 151 aaKnown RBP13.33□□□□□ -0.28
BRCA1-209ENST00000470026 CHRNA6Q15825 494 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 IMPG1Q17R60 797 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 SPESP1Q6UW49 350 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 ANKRD13BQ86YJ7 626 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 PHACTR4Q8IZ21 702 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 NXPE1Q8N323 547 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 WFDC5Q8TCV5 224 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 NETO1Q8TDF5 533 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 ADAMTS19Q8TE59 1207 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 TESCQ96BS2 214 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 PYURFQ96I23 114 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 LYSMD1Q96S90 227 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 GLYATL1P3A0A0U1RQE8 302 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 C1orf232A0A0U1RR37 186 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 SERTM1A2A2V5 107 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 K7ERQ8 282 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 EIF3FO00303 357 aaPredicted RBP13.33□□□□□ -0.28
BRCA1-209ENST00000470026 CLDN7O95471 211 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 ZBTB11O95625 1053 aaPredicted RBP13.33□□□□□ -0.28
BRCA1-209ENST00000470026 KRT6AP02538 564 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 KRT6BP04259 564 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 PRPS2P11908 318 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 BMP1P13497 986 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 RPL17P18621 184 aaKnown RBP13.33□□□□□ -0.28
BRCA1-209ENST00000470026 AGXTP21549 392 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 HNF1BP35680 557 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 MAPK8P45983 427 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 KRT6CP48668 564 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 GSTM4Q03013 218 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 ABHD18Q0P651 414 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 BOP1Q14137 746 aaKnown RBP13.33□□□□□ -0.28
BRCA1-209ENST00000470026 TTLL9Q3SXZ7 439 aa13.33□□□□□ -0.28
BRCA1-209ENST00000470026 DNAJC14Q6Y2X3 702 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms