RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 HIF1AQ16665 826 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 PARP6Q2NL67 630 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 NKAIN1Q4KMZ8 207 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 ZNF449Q6P9G9 518 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 IGFL3Q6UXB1 125 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 MAMDC2Q7Z304 686 aaPredicted RBP11.81□□□□□ -0.52
HDAC3-204ENST00000469207 TAX1BP1Q86VP1 789 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 VRK3Q8IV63 474 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 KLHDC8BQ8IXV7 354 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 TBC1D21Q8IYX1 336 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 CLEC1AQ8NC01 280 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 OR2Y1Q8NGV0 311 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.81□□□□□ -0.524e-6■■■■■ 48.1
HDAC3-204ENST00000469207 PTERQ96BW5 349 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 FER1L6-AS2Q96M78 137 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 FERMT1Q9BQL6 677 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 LACRTQ9GZZ8 138 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 ILKAPQ9H0C8 392 aaPredicted RBP11.81□□□□□ -0.52
HDAC3-204ENST00000469207 TSPY26PQ9H489 355 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 VPS37BQ9H9H4 285 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 SLC2A6Q9UGQ3 507 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 NDOR1Q9UHB4 597 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 PACSIN2Q9UNF0 486 aaPredicted RBP11.81□□□□□ -0.52
HDAC3-204ENST00000469207 EFR3BQ9Y2G0 817 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 PADI2Q9Y2J8 665 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 R3HDM2Q9Y2K5 976 aaKnown RBP11.81□□□□□ -0.52
HDAC3-204ENST00000469207 AP1M2Q9Y6Q5 423 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 CELSR2Q9HCU4 2923 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 SNRNP200O75643 2136 aaKnown RBP11.81□□□□□ -0.52
HDAC3-204ENST00000469207 CRYBG3Q68DQ2 2970 aa11.81□□□□□ -0.52
HDAC3-204ENST00000469207 ITPR2Q14571 2701 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 TCRBV7S2A1N4TA0A589 114 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 SOWAHDA6NJG2 315 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 IQCF5A8MTL0 148 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 LIN7AO14910 233 aaPredicted RBP11.8□□□□□ -0.52
HDAC3-204ENST00000469207 ZSCAN9O15535 394 aaPredicted RBP11.8□□□□□ -0.52
HDAC3-204ENST00000469207 MAGP20916 626 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 MCM3P25205 808 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 FOXN2P32314 431 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 SHMT2P34897 504 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 NSG1P42857 185 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 RWDD2BP57060 319 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 SPA17Q15506 151 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 LYPLAL1Q5VWZ2 237 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 Q6ZS92 163 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 ARHGEF18Q6ZSZ5 1173 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 TTLL10Q6ZVT0 673 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 PRUNE1Q86TP1 453 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 HPS6Q86YV9 775 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 METTL27Q8N6F8 245 aaPredicted RBP11.8□□□□□ -0.52
HDAC3-204ENST00000469207 AMER2Q8N7J2 671 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 LINC01555Q8NAE3 123 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 OR52K1Q8NGK4 314 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 OR5K2Q8NHB8 316 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 CFAP61Q8NHU2 1237 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 STYXQ8WUJ0 223 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 ZNF778Q96MU6 729 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 IL17FQ96PD4 163 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 AP1M1Q9BXS5 423 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 ATP13A2Q9NQ11 1180 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 TXLNGQ9NUQ3 528 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 EURLQ9NYK6 297 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 PLCL2Q9UPR0 1127 aa11.8□□□□□ -0.52
HDAC3-204ENST00000469207 REXO2Q9Y3B8 237 aaKnown RBP11.8□□□□□ -0.52
HDAC3-204ENST00000469207 EPN1Q9Y6I3 576 aaPredicted RBP11.8□□□□□ -0.52
HDAC3-204ENST00000469207 ANKRD12Q6UB98 2062 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 A0A0U1RQJ8 604 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 KRT87PA6NCN2 255 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 MROH6A6NGR9 719 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 AGPSO00116 658 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 AP2A2O94973 939 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 TJP3O95049 919 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 ITGA3P26006 1051 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 CCR7P32248 378 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 PTPN7P35236 360 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 GRIA1P42261 906 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 GRB7Q14451 532 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 SEMA3AQ14563 771 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 FCRL6Q6DN72 434 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 TLDC1Q6P9B6 456 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 LDB1Q86U70 411 aaPredicted RBP11.79□□□□□ -0.52
HDAC3-204ENST00000469207 MCATQ8IVS2 390 aaKnown RBP11.79□□□□□ -0.52
HDAC3-204ENST00000469207 PARP9Q8IXQ6 854 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 ZADH2Q8N4Q0 377 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 PROKR1Q8TCW9 393 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 LKAAEAR1Q8TD35 194 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 HDAC10Q969S8 669 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 C5orf34Q96MH7 638 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 IP6K3Q96PC2 410 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 C19orf43Q9BQ61 176 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 TMEM121Q9BTD3 319 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 MENTQ9BUN1 341 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 SOX17Q9H6I2 414 aaPredicted RBP11.79□□□□□ -0.52
HDAC3-204ENST00000469207 SLC6A20Q9NP91 592 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 OR6C2Q9NZP2 312 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 STOX2Q9P2F5 926 aaPredicted RBP11.79□□□□□ -0.52
HDAC3-204ENST00000469207 POLG2Q9UHN1 485 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 FEZ2Q9UHY8 353 aaPredicted RBP11.79□□□□□ -0.52
HDAC3-204ENST00000469207 SLC5A6Q9Y289 635 aa11.79□□□□□ -0.52
HDAC3-204ENST00000469207 PCDHGA10Q9Y5H3 936 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms