RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 RBM12BQ8IXT5 1001 aaKnown RBP12.9□□□□□ -0.34
PDCD11-202ENST00000466959 ARL14Q8N4G2 192 aa12.9□□□□□ -0.34
PDCD11-202ENST00000466959 ARL10Q8N8L6 244 aa12.9□□□□□ -0.34
PDCD11-202ENST00000466959 FAM181AQ8N9Y4 354 aa12.9□□□□□ -0.34
PDCD11-202ENST00000466959 MCOLN3Q8TDD5 553 aa12.9□□□□□ -0.34
PDCD11-202ENST00000466959 ZFPM2Q8WW38 1151 aa12.9□□□□□ -0.34
PDCD11-202ENST00000466959 RAD51AP1Q96B01 352 aa12.9□□□□□ -0.34
PDCD11-202ENST00000466959 CAMK1GQ96NX5 476 aa12.9□□□□□ -0.34
PDCD11-202ENST00000466959 HGH1Q9BTY7 390 aa12.9□□□□□ -0.34
PDCD11-202ENST00000466959 STN1Q9H668 368 aaKnown RBP12.9□□□□□ -0.34
PDCD11-202ENST00000466959 KIR3DX1Q9H7L2 352 aa12.9□□□□□ -0.34
PDCD11-202ENST00000466959 PLLPQ9Y342 182 aa12.9□□□□□ -0.34
PDCD11-202ENST00000466959 FASNP49327 2511 aaKnown RBP12.9□□□□□ -0.34
PDCD11-202ENST00000466959 SYCE1LA8MT33 242 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 TK2O00142 265 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 MYO1CO00159 1063 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 TM9SF1O15321 606 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 FLRT2O43155 660 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 SIGLEC6O43699 453 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 KDM1AO60341 852 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 PLIN3O60664 434 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 HIST1H2AGP0C0S8 130 aaPredicted RBP12.89□□□□□ -0.35
PDCD11-202ENST00000466959 HIST1H2ADP20671 130 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 RPA3P35244 121 aaPredicted RBP12.89□□□□□ -0.35
PDCD11-202ENST00000466959 GRK6P43250 576 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 KCNC1P48547 511 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 RPIAP49247 311 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 CDKL1Q00532 357 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 HHEXQ03014 270 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 TGFBIQ15582 683 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 CCSMST1Q4G0I0 132 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 CDKL4Q5MAI5 379 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.89□□□□□ -0.35
PDCD11-202ENST00000466959 UNQ6494/PRO21346Q6UXR6 183 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 DBX2Q6ZNG2 339 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 SLC35F3Q8IY50 421 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 EID2Q8N6I1 236 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 OR9A1PQ8NGU1 263 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 TCP10LQ8TDR4 215 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 HIST1H2AHQ96KK5 128 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 HIST1H2AJQ99878 128 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 H2AFJQ9BTM1 129 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 SLC40A1Q9NP59 571 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 KCNK9Q9NPC2 374 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 RXFP3Q9NSD7 469 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 NUDT4Q9NZJ9 180 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 MID2Q9UJV3 735 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 TMCO1Q9UM00 188 aa12.89□□□□□ -0.35
PDCD11-202ENST00000466959 TDRKHQ9Y2W6 561 aaKnown RBP12.89□□□□□ -0.35
PDCD11-202ENST00000466959 PRAMEF33A0A0G2JMD5 474 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 TMEM120BA0PK00 339 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 SUPT3HB4E1H0 165 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 TARM1B6A8C7 271 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 H3BQF6 201 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 UBXN8O00124 270 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 SUPT3HO75486 399 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 ZWINTO95229 277 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 SBK3P0C264 359 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 SLC18A1P54219 525 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 PRKG2Q13237 762 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 GRB7Q14451 532 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 NR0B2Q15466 257 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 TMEM151AQ8N4L1 468 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 PDPRQ8NCN5 879 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 OR52E1Q8NGJ3 308 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 RDH11Q8TC12 318 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 EXT2Q93063 718 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 SH3KBP1Q96B97 665 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 FBXL8Q96CD0 374 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 APOLD1Q96LR9 279 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 CCDC138Q96M89 665 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 FAM111AQ96PZ2 611 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 PKP4Q99569 1192 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 SELENOSQ9BQE4 189 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 RAB11FIP5Q9BXF6 653 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 C12orf65Q9H3J6 166 aaKnown RBP12.88□□□□□ -0.35
PDCD11-202ENST00000466959 UCK1Q9HA47 277 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 ARL15Q9NXU5 204 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 UTP6Q9NYH9 597 aaKnown RBP12.88□□□□□ -0.35
PDCD11-202ENST00000466959 NCKIPSDQ9NZQ3 722 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 CD274Q9NZQ7 290 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 SPATA7Q9P0W8 599 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 CPSF2Q9P2I0 782 aaKnown RBP12.88□□□□□ -0.35
PDCD11-202ENST00000466959 SLC17A7Q9P2U7 560 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 ZMIZ1Q9ULJ6 1067 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 BTBD3Q9Y2F9 522 aa12.88□□□□□ -0.35
PDCD11-202ENST00000466959 KRT87PA6NCN2 255 aa12.87□□□□□ -0.35
PDCD11-202ENST00000466959 TMEM8BA6NDV4 472 aa12.87□□□□□ -0.35
PDCD11-202ENST00000466959 NUDT21O43809 227 aaKnown RBP12.87□□□□□ -0.35
PDCD11-202ENST00000466959 SMIM24O75264 130 aa12.87□□□□□ -0.35
PDCD11-202ENST00000466959 GUCA1CO95843 209 aa12.87□□□□□ -0.35
PDCD11-202ENST00000466959 S100BP04271 92 aaPredicted RBP12.87□□□□□ -0.35
PDCD11-202ENST00000466959 ANXA5P08758 320 aa12.87□□□□□ -0.35
PDCD11-202ENST00000466959 TPBGLP0DKB5 382 aa12.87□□□□□ -0.35
PDCD11-202ENST00000466959 ERGP11308 486 aa12.87□□□□□ -0.35
PDCD11-202ENST00000466959 CD59P13987 128 aa12.87□□□□□ -0.35
PDCD11-202ENST00000466959 MTHFD2P13995 350 aa12.87□□□□□ -0.35
PDCD11-202ENST00000466959 TAC1P20366 129 aa12.87□□□□□ -0.35
PDCD11-202ENST00000466959 HPDP32754 393 aaPredicted RBP12.87□□□□□ -0.35
PDCD11-202ENST00000466959 BIRC2Q13490 618 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms