RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 MCUQ8NE86 351 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 OR1N1Q8NGS0 311 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 MBD3L2Q8NHZ7 208 aaPredicted RBP3.41□□□□□ -1.86
SORT1-202ENST00000466471 DTX3LQ8TDB6 740 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 C1orf54Q8WWF1 131 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 TRUB1Q8WWH5 349 aaKnown RBP3.41□□□□□ -1.86
SORT1-202ENST00000466471 BORCS5Q969J3 196 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 C3orf49Q96BT1 292 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 RNF125Q96EQ8 232 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 C9orf72Q96LT7 481 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 KCNK16Q96T55 309 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 CYTH2Q99418 400 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 OLFM1Q99784 485 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 CTRCQ99895 268 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 DDX50Q9BQ39 737 aaKnown RBP3.41□□□□□ -1.86
SORT1-202ENST00000466471 BCL7BQ9BQE9 202 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 PAAF1Q9BRP4 392 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 WDR83Q9BRX9 315 aaKnown RBP3.41□□□□□ -1.86
SORT1-202ENST00000466471 MRI1Q9BV20 369 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 SGPP1Q9BX95 441 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 OSBPL11Q9BXB4 747 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 ANKRD60Q9BZ19 345 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 OR10A2Q9H208 303 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 SLC25A32Q9H2D1 315 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 EPS8L2Q9H6S3 715 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 PSTPIP2Q9H939 334 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 UNKLQ9H9P5 680 aaKnown RBP3.41□□□□□ -1.86
SORT1-202ENST00000466471 MRPL47Q9HD33 250 aaKnown RBP3.41□□□□□ -1.86
SORT1-202ENST00000466471 SLAMF7Q9NQ25 335 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 ING3Q9NXR8 418 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 QPCTLQ9NXS2 382 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 HOXC10Q9NYD6 342 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 UTP6Q9NYH9 597 aaKnown RBP3.41□□□□□ -1.86
SORT1-202ENST00000466471 DNMT3BQ9UBC3 853 aaKnown RBP3.41□□□□□ -1.86
SORT1-202ENST00000466471 TBC1D29Q9UFV1 150 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 GIMAP2Q9UG22 337 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 RSL24D1Q9UHA3 163 aaKnown RBP3.41□□□□□ -1.86
SORT1-202ENST00000466471 SLC23A1Q9UHI7 598 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 IPO11Q9UI26 975 aaKnown RBP3.41□□□□□ -1.86
SORT1-202ENST00000466471 RIMS3Q9UJD0 308 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 ACAD8Q9UKU7 415 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 SARDHQ9UL12 918 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 POMPQ9Y244 141 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 TMEM5Q9Y2B1 443 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 DNAJC16Q9Y2G8 782 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 R3HDM2Q9Y2K5 976 aaKnown RBP3.41□□□□□ -1.86
SORT1-202ENST00000466471 Q9Y3F1 56 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 SNX9Q9Y5X1 595 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 LYVE1Q9Y5Y7 322 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 CDY1Q9Y6F8 540 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 TEX264Q9Y6I9 313 aa3.41□□□□□ -1.86
SORT1-202ENST00000466471 GOLGA4Q13439 2230 aaKnown RBP3.41□□□□□ -1.86
SORT1-202ENST00000466471 MYH1P12882 1939 aa3.4□□□□□ -1.86
SORT1-202ENST00000466471 WDR81Q562E7 1941 aa3.4□□□□□ -1.86
SORT1-202ENST00000466471 EML5Q05BV3 1969 aa3.4□□□□□ -1.86
SORT1-202ENST00000466471 AKAP9Q99996 3911 aa3.4□□□□□ -1.86
SORT1-202ENST00000466471 IGLV3-22A0A075B6J6 115 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 hCG_1818297A0A087WSY0 165 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 A0A0G2JND7 137 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 GXYLT2A0PJZ3 443 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 FUOMA2VDF0 154 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 C2orf78A6NCI8 922 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 TMEM191CA6NGB0 347 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 FAM90A20PA6NIJ5 464 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 C3orf70A6NLC5 250 aaPredicted RBP3.4□□□□□ -1.87
SORT1-202ENST00000466471 SMIM23A6NLE4 172 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 ZNF785A8K8V0 405 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 CXorf49A8MYA2 514 aaPredicted RBP3.4□□□□□ -1.87
SORT1-202ENST00000466471 CENPBD1B2RD01 187 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 TMEM233B4DJY2 109 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 E5RJQ4 531 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 H3BNH8 94 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 RAB27BO00194 218 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 RNF103O00237 685 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 ACOT8O14734 319 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 CHADO15335 359 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 TADA2AO75478 443 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 BCAS2O75934 225 aaPredicted RBP3.4□□□□□ -1.87
SORT1-202ENST00000466471 USP1O94782 785 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 TOX4O94842 621 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 OR6B1O95007 311 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 ESRRBO95718 433 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 POMCP01189 267 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 MT-ND3P03897 115 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 MMP3P08254 477 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 SNRPAP09012 282 aaKnown RBP3.4□□□□□ -1.87
SORT1-202ENST00000466471 SBK3P0C264 359 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 TMEM191BP0C7N4 346 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 FAM58BPP0C7Q3 252 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 RALAP11233 206 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 JUPP14923 745 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 ACO1P21399 889 aaKnown RBP3.4□□□□□ -1.87
SORT1-202ENST00000466471 GLRA2P23416 452 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 DCKP27707 260 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 ABCD3P28288 659 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 HMOX2P30519 316 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 MLH1P40692 756 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 PIK3CAP42336 1068 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 MAGEA12P43365 314 aa3.4□□□□□ -1.87
SORT1-202ENST00000466471 KCNC1P48547 511 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms