RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 DSCR3O14972 297 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 GOSR1O95249 250 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 SLC35G4P0C7Q5 338 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 EPXP11678 715 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 MMP13P45452 471 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 PMS1P54277 932 aaKnown RBP12.71□□□□□ -0.37
C9orf3-211ENST00000463372 AIF1P55008 147 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 LRRC63Q05C16 580 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 ITKQ08881 620 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 RABEP1Q15276 862 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 ATP13A4Q4VNC1 1196 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 RNFT1Q5M7Z0 435 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 GPRC6AQ5T6X5 926 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 METRNLQ641Q3 311 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 KAZNQ674X7 775 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 SPESP1Q6UW49 350 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 LPCAT1Q8NF37 534 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 JOSD2Q8TAC2 188 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 ZNF354BQ96LW1 612 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 YIPF4Q9BSR8 244 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 CHRNA10Q9GZZ6 450 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 YAE1D1Q9NRH1 226 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 RAD18Q9NS91 495 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 ACTR10Q9NZ32 417 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 IL1RAPL1Q9NZN1 696 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 PLCL2Q9UPR0 1127 aa12.71□□□□□ -0.37
C9orf3-211ENST00000463372 ARHGAP21Q5T5U3 1957 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 SERINC4A6NH21 518 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 TUBAL3A6NHL2 446 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 SYT5O00445 386 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 TLX2O43763 284 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-211ENST00000463372 SUN1O94901 812 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 SP1P08047 785 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 ZGLP1P0C6A0 271 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 NID1P14543 1247 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 CA4P22748 312 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 PBLDP30039 288 aaPredicted RBP12.7□□□□□ -0.38
C9orf3-211ENST00000463372 CD96P40200 585 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 PRCPP42785 496 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 OR1D4P47884 311 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 DCDC1P59894 354 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 ZIC1Q15915 447 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 MAPKAPK3Q16644 382 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 ACER2Q5QJU3 275 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 LIX1LQ8IVB5 337 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 NPWQ8N729 165 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 GPR26Q8NDV2 337 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 STT3BQ8TCJ2 826 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 ROBO4Q8WZ75 1007 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 TUBGCP2Q9BSJ2 902 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 HEBP2Q9Y5Z4 205 aa12.7□□□□□ -0.38
C9orf3-211ENST00000463372 A0A0G2JNJ9 132 aa12.69□□□□□ -0.38
C9orf3-211ENST00000463372 RCCD1A6NED2 376 aa12.69□□□□□ -0.38
C9orf3-211ENST00000463372 EIF3CLB5ME19 914 aaKnown RBP12.69□□□□□ -0.38
C9orf3-211ENST00000463372 MT-CYBP00156 380 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-211ENST00000463372 BPIFB4P59827 614 aa12.69□□□□□ -0.38
C9orf3-211ENST00000463372 RPL26P61254 145 aaKnown RBP12.69□□□□□ -0.38
C9orf3-211ENST00000463372 FANCCQ00597 558 aa12.69□□□□□ -0.38
C9orf3-211ENST00000463372 OC90Q02509 493 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-211ENST00000463372 PPP1R15BQ5SWA1 713 aa12.69□□□□□ -0.38
C9orf3-211ENST00000463372 MARC1Q5VT66 337 aa12.69□□□□□ -0.38
C9orf3-211ENST00000463372 SLC25A25Q6KCM7 469 aa12.69□□□□□ -0.38
C9orf3-211ENST00000463372 ARHGAP11AQ6P4F7 1023 aa12.69□□□□□ -0.38
C9orf3-211ENST00000463372 TRIM65Q6PJ69 517 aa12.69□□□□□ -0.38
C9orf3-211ENST00000463372 KDELC1Q6UW63 502 aa12.69□□□□□ -0.38
C9orf3-211ENST00000463372 UNC5DQ6UXZ4 953 aa12.69□□□□□ -0.38
C9orf3-211ENST00000463372 TRIM73Q86UV7 250 aa12.69□□□□□ -0.38
C9orf3-211ENST00000463372 METTL27Q8N6F8 245 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-211ENST00000463372 SPDYE1Q8NFV5 336 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-211ENST00000463372 BRSK1Q8TDC3 778 aa12.69□□□□□ -0.38
C9orf3-211ENST00000463372 CPA5Q8WXQ8 436 aa12.69□□□□□ -0.38
C9orf3-211ENST00000463372 RNF25Q96BH1 459 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-211ENST00000463372 CEP63Q96MT8 703 aa12.69□□□□□ -0.38
C9orf3-211ENST00000463372 EIF3CQ99613 913 aaKnown RBP12.69□□□□□ -0.38
C9orf3-211ENST00000463372 OLFM1Q99784 485 aa12.69□□□□□ -0.38
C9orf3-211ENST00000463372 CNPY3Q9BT09 278 aa12.69□□□□□ -0.38
C9orf3-211ENST00000463372 CLSTN2Q9H4D0 955 aa12.69□□□□□ -0.38
C9orf3-211ENST00000463372 CUTCQ9NTM9 273 aa12.69□□□□□ -0.38
C9orf3-211ENST00000463372 ZNF282Q9UDV7 671 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-211ENST00000463372 Q9UFV3 132 aa12.69□□□□□ -0.38
C9orf3-211ENST00000463372 ACSL5Q9ULC5 683 aa12.69□□□□□ -0.38
C9orf3-211ENST00000463372 RPL26L1Q9UNX3 145 aaKnown RBP12.69□□□□□ -0.38
C9orf3-211ENST00000463372 DNMT3AQ9Y6K1 912 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-211ENST00000463372 MAU2Q9Y6X3 613 aa12.69□□□□□ -0.38
C9orf3-211ENST00000463372 CR1P17927 2039 aa12.68□□□□□ -0.38
C9orf3-211ENST00000463372 A0A1W2PQ72 361 aa12.68□□□□□ -0.38
C9orf3-211ENST00000463372 MBD3L4A6NDZ8 208 aaPredicted RBP12.68□□□□□ -0.38
C9orf3-211ENST00000463372 MBD3L5A6NJ08 208 aaPredicted RBP12.68□□□□□ -0.38
C9orf3-211ENST00000463372 LSM8O95777 96 aaKnown RBP12.68□□□□□ -0.38
C9orf3-211ENST00000463372 PEX11BO96011 259 aa12.68□□□□□ -0.38
C9orf3-211ENST00000463372 ERCC2P18074 760 aa12.68□□□□□ -0.38
C9orf3-211ENST00000463372 GPD1P21695 349 aa12.68□□□□□ -0.38
C9orf3-211ENST00000463372 GCGRP47871 477 aa12.68□□□□□ -0.38
C9orf3-211ENST00000463372 FASTKQ14296 549 aaKnown RBP12.68□□□□□ -0.38
C9orf3-211ENST00000463372 POU4F3Q15319 338 aa12.68□□□□□ -0.38
C9orf3-211ENST00000463372 EMC4Q5J8M3 183 aa12.68□□□□□ -0.38
C9orf3-211ENST00000463372 FKBP15Q5T1M5 1219 aa12.68□□□□□ -0.38
C9orf3-211ENST00000463372 FCRLBQ6BAA4 426 aa12.68□□□□□ -0.38
C9orf3-211ENST00000463372 AMIGO1Q86WK6 493 aa12.68□□□□□ -0.38
C9orf3-211ENST00000463372 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms