RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 LINC00696Q6ZRV3 163 aa16.59■□□□□ 0.25
TOP3A-202ENST00000461127 AMIGO1Q86WK6 493 aa16.59■□□□□ 0.25
TOP3A-202ENST00000461127 ZNF295-AS1Q8N0V1 137 aa16.59■□□□□ 0.25
TOP3A-202ENST00000461127 HM13Q8TCT9 377 aa16.59■□□□□ 0.25
TOP3A-202ENST00000461127 FAF2Q96CS3 445 aa16.59■□□□□ 0.25
TOP3A-202ENST00000461127 LINC00615Q96LM1 132 aaPredicted RBP16.59■□□□□ 0.25
TOP3A-202ENST00000461127 LMF1Q96S06 567 aa16.59■□□□□ 0.25
TOP3A-202ENST00000461127 MRM3Q9HC36 420 aaKnown RBP16.59■□□□□ 0.25
TOP3A-202ENST00000461127 HEY1Q9Y5J3 304 aa16.59■□□□□ 0.25
TOP3A-202ENST00000461127 H3BMH7 237 aa16.58■□□□□ 0.24
TOP3A-202ENST00000461127 PIM1P11309 404 aaPredicted RBP16.58■□□□□ 0.24
TOP3A-202ENST00000461127 HADHBP55084 474 aaKnown RBP16.58■□□□□ 0.24
TOP3A-202ENST00000461127 CASP6P55212 293 aa16.58■□□□□ 0.24
TOP3A-202ENST00000461127 GNG11P61952 73 aa16.58■□□□□ 0.24
TOP3A-202ENST00000461127 ARG2P78540 354 aa16.58■□□□□ 0.24
TOP3A-202ENST00000461127 RBPJQ06330 500 aa16.58■□□□□ 0.24
TOP3A-202ENST00000461127 PDK1Q15118 436 aa16.58■□□□□ 0.24
TOP3A-202ENST00000461127 GLT6D1Q7Z4J2 308 aa16.58■□□□□ 0.24
TOP3A-202ENST00000461127 SYCE1Q8N0S2 351 aa16.58■□□□□ 0.24
TOP3A-202ENST00000461127 TRIM58Q8NG06 486 aa16.58■□□□□ 0.24
TOP3A-202ENST00000461127 OR52E1Q8NGJ3 308 aa16.58■□□□□ 0.24
TOP3A-202ENST00000461127 ZNF398Q8TD17 642 aa16.58■□□□□ 0.24
TOP3A-202ENST00000461127 FKBP10Q96AY3 582 aa16.58■□□□□ 0.24
TOP3A-202ENST00000461127 THOC3Q96J01 351 aaKnown RBP16.58■□□□□ 0.24
TOP3A-202ENST00000461127 C16orf45Q96MC5 204 aaPredicted RBP16.58■□□□□ 0.24
TOP3A-202ENST00000461127 TRIM56Q9BRZ2 755 aaKnown RBP16.58■□□□□ 0.24
TOP3A-202ENST00000461127 CHRNA10Q9GZZ6 450 aa16.58■□□□□ 0.24
TOP3A-202ENST00000461127 MVB12BQ9H7P6 319 aa16.58■□□□□ 0.24
TOP3A-202ENST00000461127 GLOD4Q9HC38 313 aa16.58■□□□□ 0.24
TOP3A-202ENST00000461127 FAM60AQ9NP50 221 aa16.58■□□□□ 0.24
TOP3A-202ENST00000461127 DYTNA2CJ06 578 aa16.57■□□□□ 0.24
TOP3A-202ENST00000461127 SOCS6O14544 535 aa16.57■□□□□ 0.24
TOP3A-202ENST00000461127 PPP1R12AO14974 1030 aaPredicted RBP16.57■□□□□ 0.24
TOP3A-202ENST00000461127 PRICKLE3O43900 615 aaPredicted RBP16.57■□□□□ 0.24
TOP3A-202ENST00000461127 RALBP11234 206 aa16.57■□□□□ 0.24
TOP3A-202ENST00000461127 ALAS2P22557 587 aa16.57■□□□□ 0.24
TOP3A-202ENST00000461127 CA7P43166 264 aa16.57■□□□□ 0.24
TOP3A-202ENST00000461127 MESDQ14696 234 aa16.57■□□□□ 0.24
TOP3A-202ENST00000461127 ZNF449Q6P9G9 518 aa16.57■□□□□ 0.24
TOP3A-202ENST00000461127 DAAM2Q86T65 1068 aa16.57■□□□□ 0.24
TOP3A-202ENST00000461127 ADGRF3Q8IZF5 1079 aa16.57■□□□□ 0.24
TOP3A-202ENST00000461127 CATSPER1Q8NEC5 780 aa16.57■□□□□ 0.24
TOP3A-202ENST00000461127 BLOC1S5Q8TDH9 187 aa16.57■□□□□ 0.24
TOP3A-202ENST00000461127 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.57■□□□□ 0.24
TOP3A-202ENST00000461127 DENND1AQ8TEH3 1009 aa16.57■□□□□ 0.24
TOP3A-202ENST00000461127 CHTF18Q8WVB6 975 aa16.57■□□□□ 0.24
TOP3A-202ENST00000461127 DLG3Q92796 817 aa16.57■□□□□ 0.24
TOP3A-202ENST00000461127 DCUN1D1Q96GG9 259 aa16.57■□□□□ 0.24
TOP3A-202ENST00000461127 WDR54Q9H977 334 aa16.57■□□□□ 0.24
TOP3A-202ENST00000461127 UBP1Q9NZI7 540 aa16.57■□□□□ 0.24
TOP3A-202ENST00000461127 ABCA2Q9BZC7 2435 aa16.56■□□□□ 0.24
TOP3A-202ENST00000461127 TRAV17A0A0B4J275 112 aa16.56■□□□□ 0.24
TOP3A-202ENST00000461127 KIF2AO00139 706 aaPredicted RBP16.56■□□□□ 0.24
TOP3A-202ENST00000461127 STX7O15400 261 aaKnown RBP16.56■□□□□ 0.24
TOP3A-202ENST00000461127 ZNF500O60304 480 aaPredicted RBP16.56■□□□□ 0.24
TOP3A-202ENST00000461127 UNC5CO95185 931 aa16.56■□□□□ 0.24
TOP3A-202ENST00000461127 PRAMEF1O95521 474 aa16.56■□□□□ 0.24
TOP3A-202ENST00000461127 ALBP02768 609 aa16.56■□□□□ 0.24
TOP3A-202ENST00000461127 SMSP52788 366 aa16.56■□□□□ 0.24
TOP3A-202ENST00000461127 RBBP7Q16576 425 aa16.56■□□□□ 0.24
TOP3A-202ENST00000461127 SLC5A12Q1EHB4 618 aa16.56■□□□□ 0.24
TOP3A-202ENST00000461127 FAM182AQ5T1J6 154 aa16.56■□□□□ 0.24
TOP3A-202ENST00000461127 C11orf63Q6NUN7 778 aa16.56■□□□□ 0.24
TOP3A-202ENST00000461127 KIRREL2Q6UWL6 708 aa16.56■□□□□ 0.24
TOP3A-202ENST00000461127 LILRA3Q8N6C8 439 aaPredicted RBP16.56■□□□□ 0.24
TOP3A-202ENST00000461127 C14orf79Q96F83 325 aa16.56■□□□□ 0.24
TOP3A-202ENST00000461127 RNF157Q96PX1 679 aa16.56■□□□□ 0.24
TOP3A-202ENST00000461127 FAM153AQ9UHL3 310 aa16.56■□□□□ 0.24
TOP3A-202ENST00000461127 SH3BGRL2Q9UJC5 107 aa16.56■□□□□ 0.24
TOP3A-202ENST00000461127 HS3ST3B1Q9Y662 390 aa16.56■□□□□ 0.24
TOP3A-202ENST00000461127 CAPN6Q9Y6Q1 641 aa16.56■□□□□ 0.24
TOP3A-202ENST00000461127 SPG11Q96JI7 2443 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 GRID2IPA4D2P6 1211 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 BUD23O43709 281 aaKnown RBP16.55■□□□□ 0.24
TOP3A-202ENST00000461127 EPOP01588 193 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 TUBB4AP04350 444 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 CD1EP15812 388 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 ITGAXP20702 1163 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 AGAP20933 346 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 CD151P48509 253 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 ARSFP54793 590 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 NOMO1Q15155 1222 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 TEX44Q53QW1 395 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 SIRPB2Q5JXA9 342 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 OVCH1Q7RTY7 1134 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 TRIM73Q86UV7 250 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 TMEM151BQ8IW70 566 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 SLC35F6Q8N357 371 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 SLC25A41Q8N5S1 370 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.55■□□□□ 0.24
TOP3A-202ENST00000461127 TAAR6Q96RI8 345 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 HGH1Q9BTY7 390 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 XKR8Q9H6D3 395 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 ASB8Q9H765 288 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 SEMA3GQ9NS98 782 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 SEC14L3Q9UDX4 400 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 NXT1Q9UKK6 140 aaKnown RBP16.55■□□□□ 0.24
TOP3A-202ENST00000461127 PLCL2Q9UPR0 1127 aa16.55■□□□□ 0.24
TOP3A-202ENST00000461127 NIPBLQ6KC79 2804 aaeCLIP16.54■□□□□ 0.24
TOP3A-202ENST00000461127 C17orf113A0A1B0GUU1 675 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms