RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 GPSM3Q9Y4H4 160 aa10.18□□□□□ -0.78
HERC4-207ENST00000460168 TRBV5-4A0A0C4DH59 114 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 A0A0G2JND7 137 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 GOLGA8QA0A0J9YX86 632 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 GOLGA8OA6NCC3 632 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 IQCF5A8MTL0 148 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 A8MUI8 341 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 C1QTNF3-AMACRE9PGA6 284 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 GOLGA8NF8WBI6 632 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 NEMP1O14524 444 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 SNNO75324 88 aaPredicted RBP10.17□□□□□ -0.78
HERC4-207ENST00000460168 RSL1D1O76021 490 aaKnown RBP10.17□□□□□ -0.78
HERC4-207ENST00000460168 WISP3O95389 354 aaPredicted RBP10.17□□□□□ -0.78
HERC4-207ENST00000460168 IFNA14P01570 189 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 SBK3P0C264 359 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 KITP10721 976 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 POU2F1P14859 743 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 VAMP1P23763 118 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 WASP42768 502 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 ZNF33BQ06732 778 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 GALNTL6Q49A17 601 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 UGT3A1Q6NUS8 523 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 DHRS4L2Q6PKH6 230 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 Q6ZVL8 140 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 DPPA4Q7L190 304 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 ASRGL1Q7L266 308 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 HSD11B1LQ7Z5J1 315 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 STK32CQ86UX6 486 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 CLDN19Q8N6F1 224 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 TTC9Q92623 222 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 OPALINQ96PE5 141 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 RAB3IPQ96QF0 476 aaPredicted RBP10.17□□□□□ -0.78
HERC4-207ENST00000460168 FAM129BQ96TA1 746 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 TM9SF2Q99805 663 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 PSD2Q9BQI7 771 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 WACQ9BTA9 647 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 CCDC106Q9BWC9 280 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 C20orf27Q9GZN8 174 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 ABCG8Q9H221 673 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 P2RY12Q9H244 342 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 KCNN2Q9H2S1 579 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 MARCOQ9UEW3 520 aaPredicted RBP10.17□□□□□ -0.78
HERC4-207ENST00000460168 GNPTGQ9UJJ9 305 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 POLHQ9Y253 713 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 TARM1B6A8C7 271 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 C2CD4DB7Z1M9 353 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 SLC22A1O15245 554 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 AQP9O43315 295 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 ITM2AO43736 263 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 ADAM11O75078 769 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 H2AFYO75367 372 aaKnown RBP10.17□□□□□ -0.78
HERC4-207ENST00000460168 LYPLA1O75608 230 aaPredicted RBP10.17□□□□□ -0.78
HERC4-207ENST00000460168 BPNT1O95861 308 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 TARSP26639 723 aaKnown RBP10.17□□□□□ -0.78
HERC4-207ENST00000460168 PBLDP30039 288 aaPredicted RBP10.17□□□□□ -0.78
HERC4-207ENST00000460168 CA5AP35218 305 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 PSMD8P48556 350 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 SEC13P55735 322 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 CYP4F2P78329 520 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 CYP4F3Q08477 520 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 ELP6Q0PNE2 266 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 ACOX1Q15067 660 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 CCDC85BQ15834 202 aaPredicted RBP10.17□□□□□ -0.78
HERC4-207ENST00000460168 USP51Q70EK9 711 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 GPR141Q7Z602 305 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 CACUL1Q86Y37 369 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 SIDT2Q8NBJ9 832 aaKnown RBP10.17□□□□□ -0.78
HERC4-207ENST00000460168 FANK1Q8TC84 345 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 SLC9A6Q92581 669 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 SCAMP4Q969E2 229 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 ARRDC3Q96B67 414 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 CDRT15Q96T59 188 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 MNTQ99583 582 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 COPS8Q99627 209 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 WRAP53Q9BUR4 548 aaKnown RBP10.17□□□□□ -0.78
HERC4-207ENST00000460168 C9orf16Q9BUW7 83 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 FAM83DQ9H4H8 585 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 PRSS16Q9NQE7 514 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 PCOLCE2Q9UKZ9 415 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 HCN2Q9UL51 889 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 OAS3Q9Y6K5 1087 aaKnown RBP10.17□□□□□ -0.78
HERC4-207ENST00000460168 STON1Q9Y6Q2 735 aa10.17□□□□□ -0.78
HERC4-207ENST00000460168 AGAP14A8MT82 685 aa10.16□□□□□ -0.78
HERC4-207ENST00000460168 PLK4O00444 970 aa10.16□□□□□ -0.78
HERC4-207ENST00000460168 DLX3O60479 287 aa10.16□□□□□ -0.78
HERC4-207ENST00000460168 SYNCRIPO60506 623 aaKnown RBP10.16□□□□□ -0.78
HERC4-207ENST00000460168 TGDSO95455 350 aa10.16□□□□□ -0.78
HERC4-207ENST00000460168 HSPA4LO95757 839 aa10.16□□□□□ -0.78
HERC4-207ENST00000460168 ADRB3P13945 408 aa10.16□□□□□ -0.78
HERC4-207ENST00000460168 SELLP14151 372 aa10.16□□□□□ -0.78
HERC4-207ENST00000460168 CD1DP15813 335 aa10.16□□□□□ -0.78
HERC4-207ENST00000460168 RPS3P23396 243 aaKnown RBP eCLIP10.16□□□□□ -0.78
HERC4-207ENST00000460168 ATP5F1P24539 256 aaPredicted RBP10.16□□□□□ -0.78
HERC4-207ENST00000460168 CTHP32929 405 aa10.16□□□□□ -0.78
HERC4-207ENST00000460168 TIE1P35590 1138 aa10.16□□□□□ -0.78
HERC4-207ENST00000460168 NUDT1P36639 197 aa10.16□□□□□ -0.78
HERC4-207ENST00000460168 NSG1P42857 185 aa10.16□□□□□ -0.78
HERC4-207ENST00000460168 NAGLUP54802 743 aa10.16□□□□□ -0.78
HERC4-207ENST00000460168 GNG2P59768 71 aa10.16□□□□□ -0.78
HERC4-207ENST00000460168 ABCE1P61221 599 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms