RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 OR2B6P58173 313 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 DDX39BQ13838 428 aaKnown RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 INAVAQ3KP66 663 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 CBWD6Q4V339 395 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 AGAP3Q96P47 875 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 COPS8Q99627 209 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ADAM2Q99965 735 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 SLCO1B3Q9NPD5 702 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ACOT13Q9NPJ3 140 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 RBM22Q9NW64 420 aaKnown RBP eCLIP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 DAGLAQ9Y4D2 1042 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 PCDHB7Q9Y5E2 793 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 CDHR4A6H8M9 788 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 PAK4O96013 591 aaPredicted RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 RGS8P57771 180 aaPredicted RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 SRP54P61011 504 aaKnown RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 MTMR2Q13614 643 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 MFSD13AQ14CX5 517 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 IRF4Q15306 451 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF783Q6ZMS7 281 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 CHPT1Q8WUD6 406 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 AARSD1Q9BTE6 412 aaKnown RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 FAM49AQ9H0Q0 323 aaPredicted RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 LRTM1Q9HBL6 345 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 MAP10Q9P2G4 905 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ERVK-11Q9UQG0 969 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 EXOSC1Q9Y3B2 195 aaKnown RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 FBXO7Q9Y3I1 522 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 A0A1W2PP18 115 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 THEGLP0DJG4 465 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 JUNDP17535 347 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 CLCA4Q14CN2 919 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 PTPROQ16827 1216 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF630Q2M218 657 aaPredicted RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 TBC1D25Q3MII6 688 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF730Q6ZMV8 503 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 PLPPR4Q7Z2D5 763 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ATXN7L3BQ96GX2 97 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 BTN2A3PQ96KV6 586 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ITPAQ9BY32 194 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 SLC22A11Q9NSA0 550 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ARHGAP20Q9P2F6 1191 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 OR6C75A6NL08 312 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 BTN3A1O00481 513 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 LINGO3P0C6S8 592 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 HSD17B7P56937 341 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 FKBP1BP68106 108 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 EN1Q05925 392 aaPredicted RBP5.12□□□□□ -1.59
CSMD3-204ENST00000455883 SLC10A7Q0GE19 358 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 UBXN11Q5T124 520 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 OR56A1Q8NGH5 318 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 FUBP3Q96I24 572 aaKnown RBP eCLIP5.12□□□□□ -1.59
CSMD3-204ENST00000455883 BMFQ96LC9 184 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 CEP41Q9BYV8 373 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 PITHD1Q9GZP4 211 aaPredicted RBP5.12□□□□□ -1.59
CSMD3-204ENST00000455883 WASF3Q9UPY6 502 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 DOCK1Q14185 1865 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 CASP8AP2Q9UKL3 1982 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 UGT1A9O60656 530 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 KCNJ13O60928 360 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 OR5F1O95221 314 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 TDP2O95551 362 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 ADH1CP00326 375 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 RPS2P15880 293 aaKnown RBP5.12□□□□□ -1.59
CSMD3-204ENST00000455883 UGT1A6P19224 532 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 CD247P20963 164 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 UGT1A1P22309 533 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 UGT1A4P22310 534 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 RGS6P49758 472 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 CDH11P55287 796 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 MELKQ14680 651 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 VARS2Q5ST30 1063 aaKnown RBP5.12□□□□□ -1.59
CSMD3-204ENST00000455883 AWAT2Q6E213 333 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 RAB12Q6IQ22 244 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 C17orf64Q86WR6 236 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 OR8H3Q8N146 312 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 TMEM199Q8N511 208 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 CCDC115Q96NT0 180 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 UGT1A7Q9HAW7 530 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 UGT1A10Q9HAW8 530 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 UGT1A8Q9HAW9 530 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 CHMP1AQ9HD42 196 aaPredicted RBP5.12□□□□□ -1.59
CSMD3-204ENST00000455883 STARD7Q9NQZ5 370 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 SNX8Q9Y5X2 465 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 DLEC1Q9Y238 1755 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 C1orf196B1AJZ1 125 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 LAMP2P13473 410 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 HSDL2Q6YN16 418 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 C19orf35Q6ZS72 473 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 PDZD9Q8IXQ8 264 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 CAMKK1Q8N5S9 505 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 ATAD1Q8NBU5 361 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 HAPLN3Q96S86 360 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 TOR4AQ9NXH8 423 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 SLC39A1Q9NY26 324 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 SLC17A6Q9P2U8 582 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 PRAMEF33A0A0G2JMD5 474 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 A0A0J9YYE9 177 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 PRAMEF10O60809 474 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 IL7P13232 177 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms