RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 MOSPD3O75425 235 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 CSDE1O75534 798 aaKnown RBP4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 CYP7B1O75881 506 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 OR6A2O95222 327 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 CBX6O95503 412 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 APOA1P02647 267 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 KRT19P08727 400 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 UMPSP11172 480 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 PRPS2P11908 318 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 F3P13726 295 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 CYP2B6P20813 491 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 PAICSP22234 425 aaKnown RBP4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 HLA-FP30511 346 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 SLC6A6P31641 620 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 CNR2P34972 360 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 DLSTP36957 453 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 MAGEB1P43366 347 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 ME1P48163 572 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 CCNHP51946 323 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 EEFSECP57772 596 aaKnown RBP4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 UBE2IP63279 158 aaKnown RBP4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 GSTO1P78417 241 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 TNK1Q13470 666 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 UBXN2BQ14CS0 331 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 ANGPT1Q15389 498 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 ATP13A5Q4VNC0 1218 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 PRAMEF7Q5VXH5 474 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 TMEM200BQ69YZ2 307 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 TAPT1Q6NXT6 567 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 ENPP7Q6UWV6 458 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 B3GLCTQ6Y288 498 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 KDM7AQ6ZMT4 941 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 MICALCLQ6ZW33 695 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 ANO5Q75V66 913 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 BZW1Q7L1Q6 419 aaKnown RBP4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 PRSS45Q7RTY3 260 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 PHLDB2Q86SQ0 1253 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 KATNAL2Q8IYT4 538 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 CFAP52Q8N1V2 620 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 DTX3Q8N9I9 347 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 C8orf58Q8NAV2 365 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 TXNDC5Q8NBS9 432 aaKnown RBP4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 PLA2G15Q8NCC3 412 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 TRPV1Q8NER1 839 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 SLC2A14Q8TDB8 520 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 ZNF483Q8TF39 744 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 TSEN15Q8WW01 171 aaKnown RBP4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 ZCCHC14Q8WYQ9 949 aaKnown RBP4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 GCDHQ92947 438 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 FAM46BQ96A09 425 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 MSI2Q96DH6 328 aaKnown RBP4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 OTUB1Q96FW1 271 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 AJUBAQ96IF1 538 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 SENP8Q96LD8 212 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 C19orf43Q9BQ61 176 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 BDH2Q9BUT1 245 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 ALG12Q9BV10 488 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 NTMT1Q9BV86 223 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 DPCDQ9BVM2 203 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 VN1R3Q9BXE9 311 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 MVB12BQ9H7P6 319 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 L2HGDHQ9H9P8 463 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 YAE1D1Q9NRH1 226 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 DONSONQ9NYP3 566 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 TAS2R14Q9NYV8 317 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 WWOXQ9NZC7 414 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 TRPM5Q9NZQ8 1165 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 COPG2Q9UBF2 871 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 DNAJB4Q9UDY4 337 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 ZFP69BQ9UJL9 534 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 DUSP10Q9Y6W6 482 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 KIF27Q86VH2 1401 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 MAST3O60307 1309 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 SH3TC1Q8TE82 1336 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 A0A1B0GUL7 405 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 A0A1W2PPW3 197 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 C9orf118A6NHY6 69 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 OR6C75A6NL08 312 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 LRRIQ3A6PVS8 624 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 KLRF2D3W0D1 207 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 NPIPB11E5RHQ5 1161 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 HIP1O00291 1037 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 PPP6CO00743 305 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 GPR42O15529 346 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 ZW10O43264 779 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 FCGR3BO75015 233 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 CSO75390 466 aaKnown RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 KRT36O76013 467 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 TJP3O95049 919 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 IL18BPO95998 194 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 CLPTM1O96005 669 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 CRYGCP07315 174 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 IGFBP1P08833 259 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 PLA2G4BP0C869 781 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 SLC2A3P11169 496 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 CPA3P15088 417 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 PRKACAP17612 351 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 ITGALP20701 1170 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 PTNP21246 168 aa4.3□□□□□ -1.72
HMGB3P21-201ENST00000452483 PSMB4P28070 264 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms