RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 FCRL3Q96P31 734 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 APOOQ9BUR5 198 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 MVB12BQ9H7P6 319 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 RMI1Q9H9A7 625 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 PAPOLBQ9NRJ5 636 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 SERTAD3Q9UJW9 196 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 PLAGL1Q9UM63 463 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 DGKBQ9Y6T7 804 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 EIF4E1BA6NMX2 242 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 C2CD4DB7Z1M9 353 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 KCNJ13O60928 360 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 TGDSO95455 350 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 EGFP01133 1207 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 CAPZA2P47755 286 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 HERVK_113P63132 956 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 ARHGAP8P85298 464 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 TIGD2Q4W5G0 525 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 KDELC1Q6UW63 502 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 CBARPQ8N350 705 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 OR2A12Q8NGT7 310 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 KIAA1191Q96A73 305 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 ERVK-6Q9BXR3 956 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 MRTO4Q9UKD2 239 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 TMEM265A0A087WTH1 108 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 FAM221BA6H8Z2 402 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 SIX3O95343 332 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 PIK3R1P27986 724 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 SIX1Q15475 284 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 ACSBG2Q5FVE4 666 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 ZNF549Q6P9A3 640 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 Q7L0L9 218 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 ZC3H7AQ8IWR0 971 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 TMEFF1Q8IYR6 380 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 NAT14Q8WUY8 206 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 CDRT15Q96T59 188 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 RUVBL1Q9Y265 456 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 PSAT1Q9Y617 370 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 HNRNPRO43390 633 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 DUX1O43812 170 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 IMPDH1P20839 514 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 RGRP47804 291 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 SLC13A2Q13183 592 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 CDX2Q99626 313 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 SPATA5L1Q9BVQ7 753 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 POPDC3Q9HBV1 291 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 LHX3Q9UBR4 397 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 WARS2Q9UGM6 360 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 DMTF1Q9Y222 760 aa13.78□□□□□ -0.2
SMARCA4-204ENST00000444061 PLXNB2O15031 1838 aa13.77□□□□□ -0.2
SMARCA4-204ENST00000444061 C2orf74A8MZ97 194 aa13.77□□□□□ -0.2
SMARCA4-204ENST00000444061 PPIBP23284 216 aaKnown RBP13.77□□□□□ -0.2
SMARCA4-204ENST00000444061 CCR2P41597 374 aa13.77□□□□□ -0.2
SMARCA4-204ENST00000444061 FAM98BQ52LJ0 330 aaKnown RBP13.77□□□□□ -0.2
SMARCA4-204ENST00000444061 SAMD14Q8IZD0 417 aaPredicted RBP13.77□□□□□ -0.2
SMARCA4-204ENST00000444061 OXR1Q8N573 874 aa13.77□□□□□ -0.2
SMARCA4-204ENST00000444061 VMP1Q96GC9 406 aa13.77□□□□□ -0.2
SMARCA4-204ENST00000444061 ZNF778Q96MU6 729 aa13.77□□□□□ -0.2
SMARCA4-204ENST00000444061 EXD2Q9NVH0 621 aa13.77□□□□□ -0.2
SMARCA4-204ENST00000444061 MARCH4Q9P2E8 410 aaPredicted RBP13.77□□□□□ -0.2
SMARCA4-204ENST00000444061 SATB2Q9UPW6 733 aa13.77□□□□□ -0.2
SMARCA4-204ENST00000444061 MUSKO15146 869 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 ZNF23P17027 643 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 SERPINB10P48595 397 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 CLDN2P57739 230 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 GCNT7Q6ZNI0 430 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 ABHD13Q7L211 337 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 DHFR2Q86XF0 187 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 OR9Q1Q8NGQ5 310 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 ADAMTS15Q8TE58 950 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 SEPHS2Q99611 448 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 XKR8Q9H6D3 395 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 C1orf109Q9NX04 203 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 ANGPT4Q9Y264 503 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 C15orf41Q9Y2V0 281 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 NME7Q9Y5B8 376 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 A0A0G2JN53 185 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 S1PR4O95977 384 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 PIM1P11309 404 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 PCSK2P16519 638 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 ME2P23368 584 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 NEK2P51955 445 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 WASHC2DQ5SRD0 308 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 OR4A15Q8NGL6 344 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 DNAJB14Q8TBM8 379 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 C7orf26Q96N11 449 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 IL26Q9NPH9 171 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 LOXHD1Q8IVV2 1947 aa13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 ATXN2Q99700 1313 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-204ENST00000444061 A8MT66 165 aa13.76□□□□□ -0.21
SMARCA4-204ENST00000444061 H3BNH8 94 aa13.76□□□□□ -0.21
SMARCA4-204ENST00000444061 PRPS2P11908 318 aa13.76□□□□□ -0.21
SMARCA4-204ENST00000444061 ATP6V1B2P21281 511 aa13.76□□□□□ -0.21
SMARCA4-204ENST00000444061 NFKB2Q00653 900 aa13.76□□□□□ -0.21
SMARCA4-204ENST00000444061 SLC9A5Q14940 896 aa13.76□□□□□ -0.21
SMARCA4-204ENST00000444061 SUSD1Q6UWL2 747 aa13.76□□□□□ -0.21
SMARCA4-204ENST00000444061 DENND1AQ8TEH3 1009 aa13.76□□□□□ -0.21
SMARCA4-204ENST00000444061 MYLK2Q9H1R3 596 aa13.76□□□□□ -0.21
SMARCA4-204ENST00000444061 SAR1AQ9NR31 198 aa13.76□□□□□ -0.21
SMARCA4-204ENST00000444061 DKK3Q9UBP4 350 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms