RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 FAM151BQ6UXP7 276 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 LRRC49Q8IUZ0 686 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 CLDN19Q8N6F1 224 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 KBTBD8Q8NFY9 601 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 OR2T29Q8NH02 315 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 DACT3Q96B18 629 aaPredicted RBP8.87□□□□□ -0.99
COPB1-202ENST00000439561 PYURFQ96I23 114 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 RDH12Q96NR8 316 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 ITPAQ9BY32 194 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 TRPV5Q9NQA5 729 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 RPRD1BQ9NQG5 326 aaKnown RBP8.87□□□□□ -0.99
COPB1-202ENST00000439561 MIOSQ9NXC5 875 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 TEKT2Q9UIF3 430 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 SNX6Q9UNH7 406 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 ST3GAL5Q9UNP4 418 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 C17orf102A2RUQ5 167 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 SMIM30A4D0T7 59 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 F5H5T6 163 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 DDNO94850 711 aaPredicted RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 PAPSS2O95340 614 aaPredicted RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 B3GALT4O96024 378 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 GLUD1P00367 558 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 FABP3P05413 133 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 RHOQP17081 205 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 LPOP22079 712 aaPredicted RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 RPL34P49207 117 aaKnown RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 ZNF33AQ06730 810 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 ACOX1Q15067 660 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 LINGO4Q6UY18 593 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 DLEU7Q6UYE1 221 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 C16orf59Q7L2K0 433 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 MMAAQ8IVH4 418 aaKnown RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 RIMKLAQ8IXN7 391 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 TAGAPQ8N103 731 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 PGAP3Q96FM1 320 aaPredicted RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 ZNF556Q9HAH1 456 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 MOV10Q9HCE1 1003 aaKnown RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 ATP13A1Q9HD20 1204 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 RAPGEFL1Q9UHV5 662 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 ABCG2Q9UNQ0 655 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 VPS9D1Q9Y2B5 631 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 IFT52Q9Y366 437 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 ARL5CA6NH57 179 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 UPK1AO00322 258 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 CNMDO75829 334 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 RPS17P08708 135 aaKnown RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 SPNP16150 400 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 OGNP20774 298 aaKnown RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 EPHA2P29317 976 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 OR1G1P47890 313 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 TTPAP49638 278 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 PPP2R2BQ00005 443 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 SEMG2Q02383 582 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 ZNF648Q5T619 568 aaPredicted RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 IRAK1BP1Q5VVH5 260 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 DEFB132Q7Z7B7 95 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 LRRTM3Q86VH5 581 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 LYSMD2Q8IV50 215 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 SLC44A2Q8IWA5 706 aaPredicted RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 GALNT12Q8IXK2 581 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 PIANPQ8IYJ0 282 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 TCAIMQ8N3R3 496 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 PAPD5Q8NDF8 572 aaKnown RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 IGSF8Q969P0 613 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 FKBP10Q96AY3 582 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 DPH2Q9BQC3 489 aaPredicted RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 TMEM246Q9BRR3 403 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 KATNAL1Q9BW62 490 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 ACOT13Q9NPJ3 140 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 UBA2Q9UBT2 640 aaPredicted RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 KLHL3Q9UH77 587 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 CRLS1Q9UJA2 301 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 SAMD4AQ9UPU9 718 aaKnown RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 SPO11Q9Y5K1 396 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 TNPO3Q9Y5L0 923 aaKnown RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 PHIPQ8WWQ0 1821 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 COL11A2P13942 1736 aaPredicted RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 A0A0D9SEW6 157 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 FFAR2O15552 330 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 KRT6AP02538 564 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 OPN1SWP03999 348 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 KRT6BP04259 564 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 KRT20P35900 424 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 KRT6CP48668 564 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 HNRNPFP52597 415 aaKnown RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 RPP38P78345 283 aaKnown RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 SMARCB1Q12824 385 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 MAD2L1Q13257 205 aaPredicted RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 SPATS1Q496A3 300 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 DUSP28Q4G0W2 176 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 NEK5Q6P3R8 708 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 CEP68Q76N32 757 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 VASH1Q7L8A9 365 aaPredicted RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 TLK2Q86UE8 772 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 ATAD1Q8NBU5 361 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 EFHD2Q96C19 240 aaPredicted RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 FAM193BQ96PV7 902 aaPredicted RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 CDK5RAP1Q96SZ6 601 aaKnown RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 COQ7Q99807 217 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 CTRCQ99895 268 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms