RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 CRHR1P34998 444 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 ATP5C1P36542 298 aaKnown RBP3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 PTPN9P43378 593 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 PCP4P48539 62 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 ALDH7A1P49419 539 aaKnown RBP3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 PLCD1P51178 756 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 HNRNPFP52597 415 aaKnown RBP3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 CDH13P55290 713 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 SIM1P81133 766 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 B4GALNT1Q00973 533 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 ACSM2AQ08AH3 577 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 DMPKQ09013 629 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 TRAF1Q13077 416 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 DRP2Q13474 957 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 ZNF169Q14929 603 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 DLG2Q15700 870 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 MAPK11Q15759 364 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 GPR162Q16538 588 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 CDO1Q16878 200 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 MTHFSDQ2M296 383 aaKnown RBP3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 KRT24Q2M2I5 525 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 VWC2Q2TAL6 325 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 KLHL40Q2TBA0 621 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 SPDYE7PQ495Y7 208 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 TMEM41BQ5BJD5 291 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 FAM160B1Q5W0V3 765 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 ACSM2BQ68CK6 577 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 ANKS6Q68DC2 871 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 TBC1D3GQ6DHY5 549 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 TMEM211Q6ICI0 200 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 TBC1D3CQ6IPX1 549 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 ZNF572Q7Z3I7 529 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 NANOGNBQ7Z5D8 188 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 TBC1D3Q8IZP1 549 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 MAFAQ8NHW3 353 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 CDC26Q8NHZ8 85 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 DNAJB14Q8TBM8 379 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 PDCD6IPQ8WUM4 868 aaKnown RBP3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 UBLCP1Q8WVY7 318 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 SNX19Q92543 992 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 RFKQ969G6 155 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 SPSB1Q96BD6 273 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 ARHGEF26Q96DR7 871 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 DAZAP1Q96EP5 407 aaKnown RBP3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 BSCL2Q96G97 398 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 SLC41A3Q96GZ6 507 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 RPGRIP1Q96KN7 1286 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 ZNF583Q96ND8 569 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 LRRC3BQ96PB8 259 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 HIST1H2AAQ96QV6 131 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 NPAS1Q99742 590 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 GPA33Q99795 319 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 SCNM1Q9BWG6 230 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 ALOXE3Q9BYJ1 711 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 PKIBQ9C010 78 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 DDX47Q9H0S4 455 aaKnown RBP3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 PLEKHA4Q9H4M7 779 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 UCK1Q9HA47 277 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 KIF9Q9HAQ2 790 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 EPB41L5Q9HCM4 733 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 KCNMB3Q9NPA1 279 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 IL26Q9NPH9 171 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 LZTFL1Q9NQ48 299 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 PIH1D3Q9NQM4 214 aaKnown RBP3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 SLC6A13Q9NSD5 602 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 SEMA4GQ9NTN9 838 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 ETAA1Q9NY74 926 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 PLK2Q9NYY3 685 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 MOCS1Q9NZB8 636 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 JKAMPQ9P055 326 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 EMC3Q9P0I2 261 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 KLHL8Q9P2G9 620 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 STX18Q9P2W9 335 aaKnown RBP3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 UBQLN2Q9UHD9 624 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 SLC23A1Q9UHI7 598 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 A4GNTQ9UNA3 340 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 SNX7Q9UNH6 387 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 ZNF148Q9UQR1 794 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 ATP6V1DQ9Y5K8 247 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 NOX1Q9Y5S8 564 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 ZMYM3Q14202 1370 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 TCRBV7S2A1N4TA0A589 114 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 ERICH2A1L162 156 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 WDR91A4D1P6 747 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 ANKRD61A6NGH8 418 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 CGB1A6NKQ9 187 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 LRRIQ3A6PVS8 624 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 C4orf47A7E2U8 309 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 NPIPB5A8MRT5 1133 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 IQCF5A8MTL0 148 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 C17orf100A8MU93 164 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 MEI4A8MW99 385 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 PRR23D1E9PI22 279 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 E9PLN8 166 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 PPP6CO00743 305 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 MGST3O14880 152 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 KIAA0391O15091 583 aaKnown RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 SMAD9O15198 467 aaKnown RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 NKX2-8O15522 239 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 ZNF264O43296 627 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms