RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 CLIC4Q9Y696 253 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 SRCAPQ6ZRS2 3230 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 INO80Q9ULG1 1556 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 AGLP35573 1532 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 PLA2R1Q13018 1463 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 IGHV4-61A0A0C4DH41 118 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 hCG_1807616A0A1W2PRN6 198 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 C1orf226A1L170 272 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 OR6C76A6NM76 312 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 MAP2K7O14733 419 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 CDC123O75794 336 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 IGHV4-59P01825 116 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 CLTBP09497 229 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 FRMD6-AS1P0C7T7 363 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 ACADLP28330 430 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 CAMPP49913 170 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 GALCP54803 685 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 CD81P60033 236 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 SGSM1Q2NKQ1 1148 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 ZNF805Q5CZA5 627 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 RARS2Q5T160 578 aaKnown RBP2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 CFAP77Q6ZQR2 320 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 SLC16A9Q7RTY1 509 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 MCEMP1Q8IX19 187 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 TAGAPQ8N103 731 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 TMTC2Q8N394 836 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 RAB42Q8N4Z0 105 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 GCSAMQ8N6F7 178 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 HM13Q8TCT9 377 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 ELMOD3Q96FG2 381 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 CALML4Q96GE6 196 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 TEX12Q9BXU0 123 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 TMX4Q9H1E5 349 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 PIGMQ9H3S5 423 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 PLK3Q9H4B4 646 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 SETD4Q9NVD3 440 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 SUCLA2Q9P2R7 463 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 ADD3Q9UEY8 706 aaKnown RBP2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 LRWD1Q9UFC0 647 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 NENFQ9UMX5 172 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 CFAP65Q6ZU64 1925 aaKnown RBP2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 SYNMO15061 1565 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 PHLPP1O60346 1717 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 PRRC2AP48634 2157 aaKnown RBP2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 CPS1P31327 1500 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 ARHGAP5Q13017 1502 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 MAP3K1Q13233 1512 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 SYCP2Q9BX26 1530 aa2.73□□□□□ -1.97
HMGB1P31-201ENST00000437242 COL16A1Q07092 1604 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 B4DLN1 442 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 ATP2A1O14983 1001 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 OGG1O15527 345 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 GPC4O75487 556 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 CKMT2P17540 419 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 CAPN2P17655 700 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 PON1P27169 355 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 CDC25CP30307 473 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 SLC15A1P46059 708 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 MRPL12P52815 198 aaKnown RBP2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 THOP1P52888 689 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 STK4Q13043 487 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 IKQ13123 557 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 IRF3Q14653 427 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 TEAD2Q15562 447 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 C15orf59Q2T9L4 293 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 ZDHHC20Q5W0Z9 365 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 KRT74Q7RTS7 529 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 ADGRA1Q86SQ6 560 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 SDCCAG8Q86SQ7 713 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 ADIPOR2Q86V24 386 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 CCDC89Q8N998 374 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 SLC38A9Q8NBW4 561 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 ZKSCAN4Q969J2 545 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 SAT2Q96F10 170 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 DACH2Q96NX9 599 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 NUDCD1Q96RS6 583 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 LRRC61Q9BV99 259 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 MRPL1Q9BYD6 325 aaKnown RBP2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 TMEM39BQ9GZU3 492 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 EPB41L5Q9HCM4 733 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 GIMAP4Q9NUV9 329 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 SEC63Q9UGP8 760 aaKnown RBP2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 MAN1B1Q9UKM7 699 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 CMAHPQ9Y471 501 aa2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 TDRD15B5MCY1 1934 aaKnown RBP2.72□□□□□ -1.97
HMGB1P31-201ENST00000437242 ZNF518AQ6AHZ1 1483 aa2.71□□□□□ -1.97
HMGB1P31-201ENST00000437242 CEP152O94986 1710 aa2.71□□□□□ -1.98
HMGB1P31-201ENST00000437242 UBR1Q8IWV7 1749 aa2.71□□□□□ -1.98
HMGB1P31-201ENST00000437242 NPATQ14207 1427 aa2.71□□□□□ -1.98
HMGB1P31-201ENST00000437242 IGLV3-10A0A075B6K4 115 aa2.71□□□□□ -1.98
HMGB1P31-201ENST00000437242 LOC100509620A0A075B734 347 aa2.71□□□□□ -1.98
HMGB1P31-201ENST00000437242 A0A1W2PQ09 198 aa2.71□□□□□ -1.98
HMGB1P31-201ENST00000437242 SYNDIG1LA6NDD5 238 aa2.71□□□□□ -1.98
HMGB1P31-201ENST00000437242 SMAD9O15198 467 aaKnown RBP2.71□□□□□ -1.98
HMGB1P31-201ENST00000437242 RTL8CO15255 209 aa2.71□□□□□ -1.98
HMGB1P31-201ENST00000437242 FIBPO43427 364 aa2.71□□□□□ -1.98
HMGB1P31-201ENST00000437242 AHCYL1O43865 530 aa2.71□□□□□ -1.98
HMGB1P31-201ENST00000437242 MITFO75030 526 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P31-201ENST00000437242 TMCC2O75069 709 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms