RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 GJB5O95377 273 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 UBTFL1P0CB47 393 aaPredicted RBP4.01□□□□□ -1.77
HMGB3-203ENST00000430118 CBSLP0DN79 551 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 KRT4P19013 534 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 GNLYP22749 145 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 EEF1B2P24534 225 aaKnown RBP4.01□□□□□ -1.77
HMGB3-203ENST00000430118 TLX1P31314 330 aaPredicted RBP4.01□□□□□ -1.77
HMGB3-203ENST00000430118 PCGF2P35227 344 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 CBSP35520 551 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 NBL1P41271 181 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 ELLP55199 621 aaPredicted RBP4.01□□□□□ -1.77
HMGB3-203ENST00000430118 GAGE2BQ13066 116 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 GPS2Q13227 327 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 TUBB2AQ13885 445 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 KRT33BQ14525 404 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 PDIA5Q14554 519 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 SLMAPQ14BN4 828 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 ASIC2Q16515 512 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 MEP1BQ16820 701 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 DUSP6Q16828 381 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 GAGE2EQ4V326 116 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 CCDC158Q5M9N0 1113 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 TEX35Q5T0J7 233 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 TMEM198Q66K66 360 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 PLA2G4FQ68DD2 849 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 SNRNP48Q6IEG0 339 aaKnown RBP4.01□□□□□ -1.77
HMGB3-203ENST00000430118 KLHL10Q6JEL2 608 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 LCN10Q6JVE6 187 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 GAGE2AQ6NT46 116 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 CAVIN1Q6NZI2 390 aaKnown RBP4.01□□□□□ -1.77
HMGB3-203ENST00000430118 IYDQ6PHW0 289 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 SUSD1Q6UWL2 747 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 CXCL17Q6UXB2 119 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 LEKR1Q6ZMV7 388 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 ZNF793Q6ZN11 406 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 ZNF627Q7L945 461 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 SDCCAG8Q86SQ7 713 aaPredicted RBP4.01□□□□□ -1.77
HMGB3-203ENST00000430118 MFN1Q8IWA4 741 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 TIGD4Q8IY51 512 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 PAPD5Q8NDF8 572 aaKnown RBP4.01□□□□□ -1.77
HMGB3-203ENST00000430118 ZNF397Q8NF99 534 aaPredicted RBP4.01□□□□□ -1.77
HMGB3-203ENST00000430118 C9orf43Q8TAL5 461 aaPredicted RBP4.01□□□□□ -1.77
HMGB3-203ENST00000430118 BBS10Q8TAM1 723 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 TEKT4Q8WW24 435 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 IGFBPL1Q8WX77 278 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 MR1Q95460 341 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 SNX21Q969T3 373 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 SPACA9Q96E40 222 aaPredicted RBP4.01□□□□□ -1.77
HMGB3-203ENST00000430118 RMDN2Q96LZ7 410 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 CCDC114Q96M63 670 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 CCDC43Q96MW1 224 aaKnown RBP4.01□□□□□ -1.77
HMGB3-203ENST00000430118 SIGLEC11Q96RL6 698 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 SLX1AQ9BQ83 275 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 WDR77Q9BQA1 342 aaPredicted RBP4.01□□□□□ -1.77
HMGB3-203ENST00000430118 MGME1Q9BQP7 344 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 LZTS2Q9BRK4 669 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 DESI2Q9BSY9 194 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 TUBB2BQ9BVA1 445 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 KRTAP9-3Q9BYQ3 159 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 LHPPQ9H008 270 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 VCPKMTQ9H867 229 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 ADPRHL2Q9NX46 363 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.01□□□□□ -1.77
HMGB3-203ENST00000430118 GAGE2DQ9UEU5 116 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 TTC7AQ9ULT0 858 aaPredicted RBP4.01□□□□□ -1.77
HMGB3-203ENST00000430118 Q9Y3F1 56 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 SRPRBQ9Y5M8 271 aaKnown RBP4.01□□□□□ -1.77
HMGB3-203ENST00000430118 POMT1Q9Y6A1 747 aa4.01□□□□□ -1.77
HMGB3-203ENST00000430118 ZDBF2Q9HCK1 2354 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 DNAH14Q0VDD8 3507 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 ARHGEF37A1IGU5 675 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 NDUFS4O43181 175 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 FMO6PO60774 539 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 TADA2AO75478 443 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 C1QL1O75973 258 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 GOSR1O95249 250 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 SMC2O95347 1197 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 BAG4O95429 457 aaKnown RBP4□□□□□ -1.77
HMGB3-203ENST00000430118 PRKCGP05129 697 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 IVLP07476 585 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 TPM1P09493 284 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 IQCF3P0C7M6 154 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 FAM200BP0CF97 657 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 PFKFB1P16118 471 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 CHRNB2P17787 502 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 ACHEP22303 614 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 HNF4AP41235 474 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 ZNF75DP51815 510 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 CAPZA1P52907 286 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 NAGLUP54802 743 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 ZXDAP98168 799 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 YWHAHQ04917 246 aaPredicted RBP4□□□□□ -1.77
HMGB3-203ENST00000430118 MAD2L1Q13257 205 aaPredicted RBP4□□□□□ -1.77
HMGB3-203ENST00000430118 DLG2Q15700 870 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 C2orf76Q3KRA6 126 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 DNAJC21Q5F1R6 531 aaKnown RBP4□□□□□ -1.77
HMGB3-203ENST00000430118 Q5PR19 223 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 C6orf136Q5SQH8 315 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 MPP7Q5T2T1 576 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 ANKRD54Q6NXT1 300 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms