RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 TSGA13Q96PP4 275 aa11.16□□□□□ -0.62
ALMS1P1-201ENST00000428767 SPSB2Q99619 263 aa11.16□□□□□ -0.62
ALMS1P1-201ENST00000428767 REPIN1Q9BWE0 567 aaKnown RBP11.16□□□□□ -0.62
ALMS1P1-201ENST00000428767 ENKD1Q9H0I2 346 aa11.16□□□□□ -0.62
ALMS1P1-201ENST00000428767 HAUS4Q9H6D7 363 aa11.16□□□□□ -0.62
ALMS1P1-201ENST00000428767 NHEJ1Q9H9Q4 299 aaPredicted RBP11.16□□□□□ -0.62
ALMS1P1-201ENST00000428767 HEBP2Q9Y5Z4 205 aa11.16□□□□□ -0.62
ALMS1P1-201ENST00000428767 SCINQ9Y6U3 715 aa11.16□□□□□ -0.62
ALMS1P1-201ENST00000428767 C17orf113A0A1B0GUU1 675 aa11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 NRDCO43847 1150 aa11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 FTLP02792 175 aaPredicted RBP11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 UGT2B7P16662 529 aa11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 DNAJA1P31689 397 aaKnown RBP11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 SSR1P43307 286 aaKnown RBP11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 IST1P53990 364 aa11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 PPP2R2AP63151 447 aa11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 PRKG2Q13237 762 aa11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 ASTE1Q2TB18 679 aaPredicted RBP11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 RAD9BQ6WBX8 426 aa11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 TTLL10Q6ZVT0 673 aa11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 COX15Q7KZN9 410 aa11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 ZNF571Q7Z3V5 609 aaPredicted RBP11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 AMIGO1Q86WK6 493 aa11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 ADGRF3Q8IZF5 1079 aa11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 PHC3Q8NDX5 983 aa11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 OR2L2Q8NH16 312 aa11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 SPATA22Q8NHS9 363 aa11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 CCDC110Q8TBZ0 833 aa11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 BRIX1Q8TDN6 353 aaKnown RBP11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 FKBP10Q96AY3 582 aa11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 C8orf44Q96CB5 159 aa11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 CCDC42Q96M95 316 aa11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 SYT11Q9BT88 431 aa11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 MRM3Q9HC36 420 aaKnown RBP11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 GPAMQ9HCL2 828 aa11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 CTSFQ9UBX1 484 aa11.15□□□□□ -0.62
ALMS1P1-201ENST00000428767 NSD1Q96L73 2696 aaPredicted RBP11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 GLYATL1P3A0A0U1RQE8 302 aa11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 FAM227AF5H4B4 570 aa11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 ZNHIT1O43257 154 aa11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 PMPCBO75439 489 aa11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 NDST3O95803 873 aa11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 SLC10A2Q12908 348 aaPredicted RBP11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 FOXD4Q12950 439 aaPredicted RBP11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 DPYSL3Q14195 570 aa11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 CCDC70Q6NSX1 233 aa11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 PPP1R2P3Q6NXS1 205 aa11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 TLDC1Q6P9B6 456 aa11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 TAOK1Q7L7X3 1001 aa11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 OVCH1Q7RTY7 1134 aa11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 PRSS58Q8IYP2 241 aa11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 CCDC170Q8IYT3 715 aa11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 DNAJB8Q8NHS0 232 aa11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 NACC2Q96BF6 587 aa11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 IMP4Q96G21 291 aaKnown RBP11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 TSPAN10Q9H1Z9 355 aaPredicted RBP11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 WDR54Q9H977 334 aa11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 UBP1Q9NZI7 540 aa11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 PYCARDQ9ULZ3 195 aa11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 MEMO1Q9Y316 297 aa11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 EPN1Q9Y6I3 576 aaPredicted RBP11.14□□□□□ -0.63
ALMS1P1-201ENST00000428767 JMJD1CQ15652 2540 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 A0A1B0GX78 115 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 FAM221AA4D161 298 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 GAPDHSO14556 408 aaPredicted RBP11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 MAP2K7O14733 419 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 AKR1B10O60218 316 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 WDPCPO95876 746 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 HPP00738 406 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 CELA2AP08217 269 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 ACPPP15309 386 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 MX2P20592 715 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 SOX11P35716 441 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 HMGCLP35914 325 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 IFI35P80217 286 aaPredicted RBP11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 AP1B1Q10567 949 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 ITGA9Q13797 1035 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 ATP13A4Q4VNC1 1196 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 C3P1Q6ZMU1 363 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 Q71RC1 249 aaPredicted RBP11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 KBTBD2Q8IY47 623 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 DTWD1Q8N5C7 304 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 ACBD4Q8NC06 268 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 CHDHQ8NE62 594 aaPredicted RBP11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 PSMF1Q92530 271 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 DLG3Q92796 817 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 SDCCAG3Q96C92 435 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 VPS50Q96JG6 964 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 CRB3Q9BUF7 120 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 TFB2MQ9H5Q4 396 aaKnown RBP11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 MRPL47Q9HD33 250 aaKnown RBP11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 ICKQ9UPZ9 632 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 SCN2AQ99250 2005 aa11.13□□□□□ -0.63
ALMS1P1-201ENST00000428767 A0A087X0T9 212 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 A0A0J9YY10 115 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 USP1O94782 785 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 FAM228BP0C875 321 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 PRR35P0CG20 571 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 MCM3P25205 808 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms