RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 TSPAN14Q8NG11 270 aa9.54□□□□□ -0.88
SNX13-203ENST00000428135 SETD6Q8TBK2 473 aa9.54□□□□□ -0.88
SNX13-203ENST00000428135 SCAMP4Q969E2 229 aa9.54□□□□□ -0.88
SNX13-203ENST00000428135 MCCC1Q96RQ3 725 aaPredicted RBP9.54□□□□□ -0.88
SNX13-203ENST00000428135 RNPEPL1Q9HAU8 725 aa9.54□□□□□ -0.88
SNX13-203ENST00000428135 PHF24Q9UPV7 400 aa9.54□□□□□ -0.88
SNX13-203ENST00000428135 LRCH1Q9Y2L9 728 aa9.54□□□□□ -0.88
SNX13-203ENST00000428135 ALS2Q96Q42 1657 aa9.54□□□□□ -0.88
SNX13-203ENST00000428135 HEPACAM2A8MVW5 462 aa9.54□□□□□ -0.88
SNX13-203ENST00000428135 PDPK1O15530 556 aa9.54□□□□□ -0.88
SNX13-203ENST00000428135 LATO43561 262 aa9.54□□□□□ -0.88
SNX13-203ENST00000428135 PI15O43692 258 aa9.54□□□□□ -0.88
SNX13-203ENST00000428135 NOBOXO60393 691 aa9.54□□□□□ -0.88
SNX13-203ENST00000428135 ETS2P15036 469 aa9.54□□□□□ -0.88
SNX13-203ENST00000428135 POU5F1Q01860 360 aaKnown RBP9.54□□□□□ -0.88
SNX13-203ENST00000428135 ENPEPQ07075 957 aa9.54□□□□□ -0.88
SNX13-203ENST00000428135 TMEM164Q5U3C3 297 aa9.54□□□□□ -0.88
SNX13-203ENST00000428135 FAM13CQ8NE31 585 aa9.54□□□□□ -0.88
SNX13-203ENST00000428135 ARHGAP9Q9BRR9 750 aa9.54□□□□□ -0.88
SNX13-203ENST00000428135 TTYH3Q9C0H2 523 aa9.54□□□□□ -0.88
SNX13-203ENST00000428135 LRMDAQ9H2I8 198 aa9.54□□□□□ -0.88
SNX13-203ENST00000428135 C15orf41Q9Y2V0 281 aa9.54□□□□□ -0.88
SNX13-203ENST00000428135 HEBP2Q9Y5Z4 205 aa9.54□□□□□ -0.88
SNX13-203ENST00000428135 MAGEB17A8MXT2 336 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 ANKRD66B4E2M5 251 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 FAM72CH0Y354 149 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 SNPHO15079 494 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 ECI2O75521 394 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 CSTF2P33240 577 aaKnown RBP eCLIP9.53□□□□□ -0.88
SNX13-203ENST00000428135 IDH3AP50213 366 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 FAM72AQ5TYM5 149 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 FAM72DQ6L9T8 149 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 Q6ZVL8 140 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 FAM72BQ86X60 149 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 SMG8Q8ND04 991 aaKnown RBP9.53□□□□□ -0.88
SNX13-203ENST00000428135 TRAPPC9Q96Q05 1148 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 TEFMQ96QE5 360 aaKnown RBP9.53□□□□□ -0.88
SNX13-203ENST00000428135 CCM2Q9BSQ5 444 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 ABI3Q9P2A4 366 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 SCN11AQ9UI33 1791 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 FAM86C2PA6NEL3 165 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 MAGEB3O15480 346 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 FABP3P05413 133 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 ETV3P41162 512 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 ITPRIPL2Q3MIP1 535 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 SLC9B1Q4ZJI4 515 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 TOR1AIP1Q5JTV8 583 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 TTC23Q5W5X9 447 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 ZNF662Q6ZS27 426 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 OAFQ86UD1 273 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 DEPDC4Q8N2C3 294 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 MYDGFQ969H8 173 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 DGAT2Q96PD7 388 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 PEBP4Q96S96 227 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 TCF12Q99081 682 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 NDC1Q9BTX1 674 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 PDCD10Q9BUL8 212 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 TDRD1Q9BXT4 1180 aaKnown RBP9.53□□□□□ -0.88
SNX13-203ENST00000428135 MRPS26Q9BYN8 205 aaKnown RBP9.53□□□□□ -0.88
SNX13-203ENST00000428135 GIN1Q9NXP7 522 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 SAMD4AQ9UPU9 718 aaKnown RBP9.53□□□□□ -0.88
SNX13-203ENST00000428135 GPC6Q9Y625 555 aaPredicted RBP9.53□□□□□ -0.88
SNX13-203ENST00000428135 TTC34A8MYJ7 566 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 M0R2N6 131 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 CHN2P52757 468 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 PON2Q15165 354 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 CLEC12AQ5QGZ9 265 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 DCST1Q5T197 706 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 KRT74Q7RTS7 529 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 TMEM110Q86TL2 294 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 ZNF761Q86XN6 746 aaPredicted RBP9.53□□□□□ -0.88
SNX13-203ENST00000428135 PEX5LQ8IYB4 626 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 TTC9BQ8N6N2 239 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 PSMA8Q8TAA3 256 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 TFGQ92734 400 aaPredicted RBP9.53□□□□□ -0.88
SNX13-203ENST00000428135 ZNF570Q96NI8 536 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 FCRL5Q96RD9 977 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 P2RY13Q9BPV8 354 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 RTKNQ9BST9 563 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 ZNF395Q9H8N7 513 aaPredicted RBP9.53□□□□□ -0.88
SNX13-203ENST00000428135 MTRRQ9UBK8 725 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 K7EPI3 171 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 TEX28O15482 410 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 SLC7A4O43246 635 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 ITM2AO43736 263 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 PLIN3O60664 434 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 TIMP1P01033 207 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 IGFBP5P24593 272 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 SCRN3Q0VDG4 424 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 PPP1R8Q12972 351 aaKnown RBP9.53□□□□□ -0.88
SNX13-203ENST00000428135 MORN1Q5T089 497 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 BROXQ5VW32 411 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 CDCA2Q69YH5 1023 aaPredicted RBP9.53□□□□□ -0.88
SNX13-203ENST00000428135 TAS1R3Q7RTX0 852 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 PACS2Q86VP3 889 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 ATCAYQ86WG3 371 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 TERB1Q8NA31 727 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 OR10T2Q8NGX3 314 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 TMEM40Q8WWA1 233 aa9.53□□□□□ -0.88
SNX13-203ENST00000428135 TRMOQ9BU70 441 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms