RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 LOXL4Q96JB6 756 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 MAGEB10Q96LZ2 347 aaPredicted RBP10.06□□□□□ -0.8
MDC1-205ENST00000425072 C12orf66Q96MD2 445 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 CCT8L2Q96SF2 557 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 INSM2Q96T92 566 aaPredicted RBP10.06□□□□□ -0.8
MDC1-205ENST00000425072 PRRX2Q99811 253 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 HGH1Q9BTY7 390 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 RAB11FIP5Q9BXF6 653 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 SLC32A1Q9H598 525 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 PRDM8Q9NQV8 689 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 WWOXQ9NZC7 414 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 APOBEC3BQ9UH17 382 aaKnown RBP10.06□□□□□ -0.8
MDC1-205ENST00000425072 RAP2CQ9Y3L5 183 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 PLEKHM1Q9Y4G2 1056 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 CSNK1G3Q9Y6M4 447 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 SDK1Q7Z5N4 2213 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 PI4KAP42356 2102 aa10.06□□□□□ -0.8
MDC1-205ENST00000425072 ARHGEF33A8MVX0 844 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 K7EPI3 171 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 MYO1CO00159 1063 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 EDF1O60869 148 aaKnown RBP10.05□□□□□ -0.8
MDC1-205ENST00000425072 FAM107AO95990 144 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 FGF4P08620 206 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 TROVE2P10155 538 aaKnown RBP eCLIP10.05□□□□□ -0.8
MDC1-205ENST00000425072 AK4P27144 223 aaPredicted RBP10.05□□□□□ -0.8
MDC1-205ENST00000425072 EEF1DP29692 281 aaKnown RBP10.05□□□□□ -0.8
MDC1-205ENST00000425072 RXRGP48443 463 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 RPL14P50914 215 aaKnown RBP10.05□□□□□ -0.8
MDC1-205ENST00000425072 SEC24CP53992 1094 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 PKNOX1P55347 436 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 CLCQ05315 142 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 CLCA4Q14CN2 919 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 RPE65Q16518 533 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 ARL13AQ5H913 290 aaPredicted RBP10.05□□□□□ -0.8
MDC1-205ENST00000425072 CAPN13Q6MZZ7 669 aaPredicted RBP10.05□□□□□ -0.8
MDC1-205ENST00000425072 ZC3H14Q6PJT7 736 aaKnown RBP10.05□□□□□ -0.8
MDC1-205ENST00000425072 SLC30A9Q6PML9 568 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 AGTRAPQ6RW13 159 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 SPATS2Q86XZ4 545 aaKnown RBP10.05□□□□□ -0.8
MDC1-205ENST00000425072 RBM12BQ8IXT5 1001 aaKnown RBP10.05□□□□□ -0.8
MDC1-205ENST00000425072 FAM46DQ8NEK8 389 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 PIWIL2Q8TC59 973 aaKnown RBP10.05□□□□□ -0.8
MDC1-205ENST00000425072 FAR2Q96K12 515 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 CAMK1GQ96NX5 476 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 PKP4Q99569 1192 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 MIPEPQ99797 713 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 SIKE1Q9BRV8 207 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 TRIM55Q9BYV6 548 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 PCBD2Q9H0N5 130 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 SPATA7Q9P0W8 599 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 OPTCQ9UBM4 332 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 VTI1BQ9UEU0 232 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 TBC1D29Q9UFV1 150 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 RAB23Q9ULC3 237 aa10.05□□□□□ -0.8
MDC1-205ENST00000425072 ARHGEF17Q96PE2 2063 aaPredicted RBP10.05□□□□□ -0.8
MDC1-205ENST00000425072 A0A1B0GVT2 93 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 YKT6O15498 198 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 TAPBPO15533 448 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 CCNT2O60583 730 aaKnown RBP10.04□□□□□ -0.8
MDC1-205ENST00000425072 OTCP00480 354 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 VIPP01282 170 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 ANXA6P08133 673 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 SYPP08247 313 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 MTHFD1P11586 935 aaKnown RBP10.04□□□□□ -0.8
MDC1-205ENST00000425072 CTSKP43235 329 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 HSPA7P48741 367 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 OCRLQ01968 901 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 GABPB1Q06547 395 aaPredicted RBP10.04□□□□□ -0.8
MDC1-205ENST00000425072 LCP2Q13094 533 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 SRSF5Q13243 272 aaKnown RBP10.04□□□□□ -0.8
MDC1-205ENST00000425072 GTF2H2Q13888 395 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 ZNF542PQ5EBM4 170 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 GKAP1Q5VSY0 366 aaPredicted RBP10.04□□□□□ -0.8
MDC1-205ENST00000425072 GTF2H2CQ6P1K8 395 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 XKR5Q6UX68 686 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 ZCCHC23Q6ZST2 131 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 FRMD7Q6ZUT3 714 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 LRRC70Q7Z2Q7 622 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 SLC9B2Q86UD5 537 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 NRROSQ86YC3 692 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 SPNS2Q8IVW8 549 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 TRIM48Q8IWZ4 208 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 KLHDC8AQ8IYD2 350 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 SYTL1Q8IYJ3 562 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 CLYBLQ8N0X4 340 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 TEX9Q8N6V9 391 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 BCAS4Q8TDM0 211 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 LMX1AQ8TE12 382 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 UBTD2Q8WUN7 234 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 SH3KBP1Q96B97 665 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 RMDN2Q96LZ7 410 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 TMEM237Q96Q45 408 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 PLCD4Q9BRC7 762 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 IRF2BPLQ9H1B7 796 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 STN1Q9H668 368 aaKnown RBP10.04□□□□□ -0.8
MDC1-205ENST00000425072 KIR3DX1Q9H7L2 352 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 IPPKQ9H8X2 491 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 IMP3Q9NV31 184 aaKnown RBP10.04□□□□□ -0.8
MDC1-205ENST00000425072 DNAJC11Q9NVH1 559 aa10.04□□□□□ -0.8
MDC1-205ENST00000425072 FGFR1OP2Q9NVK5 253 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms