RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 NAT9Q9BTE0 207 aa16.23■□□□□ 0.19
SF1-207ENST00000413951 FAM114A2Q9NRY5 505 aa16.23■□□□□ 0.19
SF1-207ENST00000413951 SAMD15Q9P1V8 674 aa16.23■□□□□ 0.19
SF1-207ENST00000413951 PCDHGA9Q9Y5G4 932 aaKnown RBP16.23■□□□□ 0.19
SF1-207ENST00000413951 CFAP20Q9Y6A4 193 aaKnown RBP16.23■□□□□ 0.19
SF1-207ENST00000413951 TEX264Q9Y6I9 313 aa16.23■□□□□ 0.19
SF1-207ENST00000413951 ZCWPW2A0A1B0GU75 182 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 CCDC78A2IDD5 438 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 VPS4BO75351 444 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 USP1O94782 785 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 TIAF1O95411 115 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 FURINP09958 794 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 RAB40ALP0C0E4 278 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 MSL3P1P0C860 447 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 ATP1B2P14415 290 aaPredicted RBP16.22■□□□□ 0.19
SF1-207ENST00000413951 PGAM1P18669 254 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 CDH3P22223 829 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 ARCN1P48444 511 aaKnown RBP16.22■□□□□ 0.19
SF1-207ENST00000413951 CD151P48509 253 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 PRLHRP49683 370 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 PGDP52209 483 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 PPP1CAP62136 330 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 CACNG1Q06432 222 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 ANKRD20A4Q4UJ75 823 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 CAPRIN2Q6IMN6 1127 aaKnown RBP16.22■□□□□ 0.19
SF1-207ENST00000413951 AFTPHQ6ULP2 937 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 IGDCC3Q8IVU1 814 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 NXPE1Q8N323 547 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 LCN9Q8WX39 176 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 HDAC10Q969S8 669 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 ZNF501Q96CX3 271 aaPredicted RBP16.22■□□□□ 0.19
SF1-207ENST00000413951 DPH2Q9BQC3 489 aaPredicted RBP16.22■□□□□ 0.19
SF1-207ENST00000413951 TRIM56Q9BRZ2 755 aaKnown RBP16.22■□□□□ 0.19
SF1-207ENST00000413951 SLC7A5P2Q9GIP4 190 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 SRMSQ9H3Y6 488 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 PLAC1Q9HBJ0 212 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 SERTAD3Q9UJW9 196 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 VPS4AQ9UN37 437 aa16.22■□□□□ 0.19
SF1-207ENST00000413951 IGLV3-16A0A075B6K0 115 aa16.21■□□□□ 0.19
SF1-207ENST00000413951 EIF3HO15372 352 aaKnown RBP eCLIP16.21■□□□□ 0.19
SF1-207ENST00000413951 BANF1O75531 89 aa16.21■□□□□ 0.19
SF1-207ENST00000413951 GOT2P00505 430 aaKnown RBP16.21■□□□□ 0.19
SF1-207ENST00000413951 POLBP06746 335 aa16.21■□□□□ 0.19
SF1-207ENST00000413951 HBQ1P09105 142 aa16.21■□□□□ 0.19
SF1-207ENST00000413951 VARSP26640 1264 aaKnown RBP16.21■□□□□ 0.19
SF1-207ENST00000413951 ECHS1P30084 290 aa16.21■□□□□ 0.19
SF1-207ENST00000413951 PLTPP55058 493 aa16.21■□□□□ 0.19
SF1-207ENST00000413951 RPA4Q13156 261 aa16.21■□□□□ 0.19
SF1-207ENST00000413951 BBS9Q3SYG4 887 aa16.21■□□□□ 0.19
SF1-207ENST00000413951 STEAP4Q687X5 459 aa16.21■□□□□ 0.19
SF1-207ENST00000413951 CASC4Q6P4E1 433 aa16.21■□□□□ 0.19
SF1-207ENST00000413951 ZNF517Q6ZMY9 492 aaPredicted RBP16.21■□□□□ 0.19
SF1-207ENST00000413951 MICALCLQ6ZW33 695 aa16.21■□□□□ 0.19
SF1-207ENST00000413951 PIANPQ8IYJ0 282 aa16.21■□□□□ 0.19
SF1-207ENST00000413951 OR4E2Q8NGC2 313 aa16.21■□□□□ 0.19
SF1-207ENST00000413951 CLIP3Q96DZ5 547 aa16.21■□□□□ 0.19
SF1-207ENST00000413951 C17orf62Q9BQA9 187 aa16.21■□□□□ 0.19
SF1-207ENST00000413951 SLC25A23Q9BV35 468 aa16.21■□□□□ 0.19
SF1-207ENST00000413951 POMT2Q9UKY4 750 aa16.21■□□□□ 0.19
SF1-207ENST00000413951 SNX7Q9UNH6 387 aa16.21■□□□□ 0.19
SF1-207ENST00000413951 HECTD1Q9ULT8 2610 aa16.21■□□□□ 0.19
SF1-207ENST00000413951 GSAPA4D1B5 854 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 CLEC18AA5D8T8 446 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 TTLL8A6PVC2 850 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 MEN1O00255 615 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 QSOX1O00391 747 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 TTC4O95801 387 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 GP1BBP13224 206 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 POLR2CP19387 275 aaPredicted RBP16.2■□□□□ 0.18
SF1-207ENST00000413951 ELK3P41970 407 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 PREPP48147 710 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 KPNA2P52292 529 aaKnown RBP16.2■□□□□ 0.18
SF1-207ENST00000413951 PRAMEP78395 509 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 FRG1Q14331 258 aaKnown RBP16.2■□□□□ 0.18
SF1-207ENST00000413951 CRYMQ14894 314 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 GPR19Q15760 415 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 CES3Q6UWW8 571 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 CLEC18BQ6UXF7 455 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 CENPUQ71F23 418 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 CLEC18CQ8NCF0 446 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 OR4L1Q8NH43 312 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 ZNF669Q96BR6 464 aaPredicted RBP16.2■□□□□ 0.18
SF1-207ENST00000413951 FERD3LQ96RJ6 166 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 NLNQ9BYT8 704 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 ING2Q9H160 280 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 TFB2MQ9H5Q4 396 aaKnown RBP16.2■□□□□ 0.18
SF1-207ENST00000413951 MVB12BQ9H7P6 319 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 ZDHHC3Q9NYG2 299 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 FAM8A1Q9UBU6 413 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 PLAAQ9Y263 795 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 PADI2Q9Y2J8 665 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 ZNF451Q9Y4E5 1061 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 MAD1L1Q9Y6D9 718 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 FAM169AQ9Y6X4 670 aa16.2■□□□□ 0.18
SF1-207ENST00000413951 OR51F1A6NGY5 319 aa16.19■□□□□ 0.18
SF1-207ENST00000413951 F8W8V4 182 aa16.19■□□□□ 0.18
SF1-207ENST00000413951 KDM1AO60341 852 aa16.19■□□□□ 0.18
SF1-207ENST00000413951 KLHL41O60662 606 aa16.19■□□□□ 0.18
SF1-207ENST00000413951 CD63P08962 238 aa16.19■□□□□ 0.18
SF1-207ENST00000413951 PRSS56P0CW18 603 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms