RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 TBC1D10AQ9BXI6 508 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 CPEB1Q9BZB8 566 aaKnown RBP5.25□□□□□ -1.57
LINC00342-201ENST00000412393 PDFQ9HBH1 243 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 DNAJC28Q9NX36 388 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 STX18Q9P2W9 335 aaKnown RBP5.25□□□□□ -1.57
LINC00342-201ENST00000412393 ASH2LQ9UBL3 628 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 IP6K2Q9UHH9 426 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 ITM2BQ9Y287 266 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 NEU2Q9Y3R4 380 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 MFHAS1Q9Y4C4 1052 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 ALG6Q9Y672 507 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 UNC13CQ8NB66 2214 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 FRYQ5TBA9 3013 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 APC2O95996 2303 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 SPTY2D1-AS1A0A0U1RR47 76 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 TSPAN11A1L157 253 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 TRABD2BA6NFA1 517 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 NEMP2A6NFY4 417 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 TRIM38O00635 465 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 CCDC22O60826 627 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 EDF1O60869 148 aaKnown RBP5.24□□□□□ -1.57
LINC00342-201ENST00000412393 PIAS2O75928 621 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 CAPNS1P04632 268 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 SCG5P05408 212 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 PABPC4LP0CB38 370 aaKnown RBP5.24□□□□□ -1.57
LINC00342-201ENST00000412393 ALPPL2P10696 532 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 CPA3P15088 417 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 TCF4P15884 667 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 CKMT2P17540 419 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 GM2AP17900 193 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 DGKAP23743 735 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 IL1R2P27930 398 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 HNF1BP35680 557 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 IGFALSP35858 605 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 RPL21P46778 160 aaKnown RBP5.24□□□□□ -1.57
LINC00342-201ENST00000412393 RGRP47804 291 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 PTDSS1P48651 473 aaKnown RBP5.24□□□□□ -1.57
LINC00342-201ENST00000412393 CSNK1DP48730 415 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 HCAR3P49019 387 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 SUOXP51687 545 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 RAP1GDS1P52306 607 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 THOP1P52888 689 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 CLDN6P56747 220 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 PFN3P60673 137 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 IL10RBQ08334 325 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 ELP6Q0PNE2 266 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 AP1B1Q10567 949 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 ILKQ13418 452 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 ITGA9Q13797 1035 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 PDE1CQ14123 709 aaPredicted RBP5.24□□□□□ -1.57
LINC00342-201ENST00000412393 PTK2BQ14289 1009 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 FZD2Q14332 565 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 PIGHQ14442 188 aaPredicted RBP5.24□□□□□ -1.57
LINC00342-201ENST00000412393 SMAD1Q15797 465 aaKnown RBP5.24□□□□□ -1.57
LINC00342-201ENST00000412393 DPYSL2Q16555 572 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 PDK4Q16654 411 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 UGP2Q16851 508 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 SMTNL2Q2TAL5 461 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 TMEM52BQ4KMG9 183 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 BOLA3Q53S33 107 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 FNDC7Q5VTL7 733 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 AFMIDQ63HM1 303 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 ARHGAP36Q6ZRI8 547 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 RINLQ6ZS11 566 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 ARHGAP22Q7Z5H3 698 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 PARGQ86W56 976 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 PROSER1Q86XN7 944 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 SLC13A5Q86YT5 568 aaPredicted RBP5.24□□□□□ -1.57
LINC00342-201ENST00000412393 ARHGAP12Q8IWW6 846 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 NPWQ8N729 165 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 OR4C6Q8NH72 309 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 HCAR2Q8TDS4 363 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 CXorf40AQ8TE69 158 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 CTNNBL1Q8WYA6 563 aaPredicted RBP5.24□□□□□ -1.57
LINC00342-201ENST00000412393 HSPH1Q92598 858 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 ZNF641Q96N77 438 aaPredicted RBP5.24□□□□□ -1.57
LINC00342-201ENST00000412393 NUDCD1Q96RS6 583 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 TUBGCP5Q96RT8 1024 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 WRAP53Q9BUR4 548 aaKnown RBP5.24□□□□□ -1.57
LINC00342-201ENST00000412393 NUP85Q9BW27 656 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 CINPQ9BW66 212 aaPredicted RBP5.24□□□□□ -1.57
LINC00342-201ENST00000412393 C1QTNF7Q9BXJ2 289 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 PITPNM3Q9BZ71 974 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 THAP2Q9H0W7 228 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 VCX3BQ9H321 246 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 ATP13A3Q9H7F0 1226 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 CAAP1Q9H8G2 361 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 ZWILCHQ9H900 591 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 VCX3AQ9NNX9 186 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 GPR27Q9NS67 375 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 FGFR1OP2Q9NVK5 253 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 IRAK4Q9NWZ3 460 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 UCKL1Q9NWZ5 548 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 NKX1-2Q9UD57 310 aaPredicted RBP5.24□□□□□ -1.57
LINC00342-201ENST00000412393 SCOCQ9UIL1 159 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 ANAPC7Q9UJX3 599 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 PACSIN2Q9UNF0 486 aaPredicted RBP5.24□□□□□ -1.57
LINC00342-201ENST00000412393 CHKBQ9Y259 395 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 RPS6KL1Q9Y6S9 549 aa5.24□□□□□ -1.57
LINC00342-201ENST00000412393 COMMD3-BMI1R4GMX3 469 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms