RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 JPH3Q8WXH2 748 aaPredicted RBP16.73■□□□□ 0.27
PTPRA-205ENST00000399903 MRGPRX2Q96LB1 330 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 SLC52A3Q9NQ40 469 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 TREX1Q9NSU2 369 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 RNF6Q9Y252 685 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 NPEPPSL1A6NEC2 478 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 SLC2A4P14672 509 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 SERPINH1P50454 418 aaKnown RBP16.72■□□□□ 0.27
PTPRA-205ENST00000399903 PLEKHG6Q3KR16 790 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 ERAP2Q6P179 960 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 ZNF517Q6ZMY9 492 aaPredicted RBP16.72■□□□□ 0.27
PTPRA-205ENST00000399903 IQCF2Q8IXL9 164 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 OR5K1Q8NHB7 308 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 METTL6Q8TCB7 284 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 ZNF583Q96ND8 569 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 RTP3Q9BQQ7 232 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 RANGRFQ9HD47 186 aaPredicted RBP16.72■□□□□ 0.27
PTPRA-205ENST00000399903 NUFIP1Q9UHK0 495 aaKnown RBP16.72■□□□□ 0.27
PTPRA-205ENST00000399903 EIF2B4Q9UI10 523 aaKnown RBP16.72■□□□□ 0.27
PTPRA-205ENST00000399903 OSGIN1Q9UJX0 560 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 MAU2Q9Y6X3 613 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 FAM234BA2RU67 622 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 UNCXA6NJT0 531 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 GABRDO14764 452 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 HAT1O14929 419 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 HPRP00739 348 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 CSF2P04141 144 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 NTRK1P04629 796 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 SLC15A1P46059 708 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 P2RX3P56373 397 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 SLC35A2P78381 396 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 GPLD1P80108 840 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 NEK10Q6ZWH5 1172 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 LACC1Q8IV20 430 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 TTC29Q8NA56 475 aaPredicted RBP16.72■□□□□ 0.27
PTPRA-205ENST00000399903 SLC39A8Q9C0K1 460 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 CD274Q9NZQ7 290 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 EVPLLA8MZ36 301 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 CNPP09543 421 aaKnown RBP16.72■□□□□ 0.27
PTPRA-205ENST00000399903 SLC26A3P40879 764 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 HTR3AP46098 478 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 HTR6P50406 440 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 ARHGDIAP52565 204 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 TIGD6Q17RP2 521 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 PAQR3Q6TCH7 311 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 SPATA19Q7Z5L4 167 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 ANKRD46Q86W74 232 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 TRNT1Q96Q11 434 aaKnown RBP16.72■□□□□ 0.27
PTPRA-205ENST00000399903 SMPD4Q9NXE4 827 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 VNN3Q9NY84 501 aa16.72■□□□□ 0.27
PTPRA-205ENST00000399903 ELOVL7A1L3X0 281 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 METTL15A6NJ78 407 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 FFAR3O14843 346 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 GPR42O15529 346 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 SCO2O43819 266 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 VIPP01282 170 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 PRKAR2AP13861 404 aaKnown RBP16.71■□□□□ 0.27
PTPRA-205ENST00000399903 DNAJB1P25685 340 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 KRT20P35900 424 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 FAM174BQ3ZCQ3 159 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 GPR153Q6NV75 609 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 OR52B6Q8NGF0 335 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 OR5H6Q8NGV6 325 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 POLR3BQ9NW08 1133 aaPredicted RBP16.71■□□□□ 0.27
PTPRA-205ENST00000399903 FBXL12Q9NXK8 326 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 PDP1Q9P0J1 537 aaPredicted RBP16.71■□□□□ 0.27
PTPRA-205ENST00000399903 DNMT3AQ9Y6K1 912 aaPredicted RBP16.71■□□□□ 0.27
PTPRA-205ENST00000399903 TEX28O15482 410 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 SLC2A3P11169 496 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 CYBAP13498 195 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 MTHFD2P13995 350 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 DDX5P17844 614 aaKnown RBP16.71■□□□□ 0.27
PTPRA-205ENST00000399903 CTSKP43235 329 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 MVKQ03426 396 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 SLAMF1Q13291 335 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 SYT6Q5T7P8 510 aaPredicted RBP16.71■□□□□ 0.27
PTPRA-205ENST00000399903 ZNF438Q7Z4V0 828 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 SVOPLQ8N434 492 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 TSEN34Q9BSV6 310 aaKnown RBP16.71■□□□□ 0.27
PTPRA-205ENST00000399903 COPS4Q9BT78 406 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 ITPAQ9BY32 194 aa16.71■□□□□ 0.27
PTPRA-205ENST00000399903 PABPN1LA6NDY0 278 aaKnown RBP16.7■□□□□ 0.26
PTPRA-205ENST00000399903 FKBP9O95302 570 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 S1PR4O95977 384 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 GPR15P49685 360 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 ERVK-8P63133 956 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 RPL38P63173 70 aaKnown RBP16.7■□□□□ 0.26
PTPRA-205ENST00000399903 MAPKAPK3Q16644 382 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 UPP1Q16831 310 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 SYCE2Q6PIF2 218 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 DLEU7Q6UYE1 221 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 CEP68Q76N32 757 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 ZNF280BQ86YH2 543 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 FCRL5Q96RD9 977 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 APOL4Q9BPW4 351 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 STMN3Q9NZ72 180 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 HCSTQ9UBK5 93 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 TMEFF2Q9UIK5 374 aaPredicted RBP16.7■□□□□ 0.26
PTPRA-205ENST00000399903 ECI2O75521 394 aa16.7■□□□□ 0.26
PTPRA-205ENST00000399903 FGF4P08620 206 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms