RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 GTPBP3Q969Y2 492 aaKnown RBP13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 HOPXQ9BPY8 73 aaPredicted RBP13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 RIOK2Q9BVS4 552 aaKnown RBP13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 ZNF576Q9H609 170 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 A0A0J9YVX5 310 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 WNT9AO14904 365 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 AP2A2O94973 939 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 ALPIP09923 528 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 PRKAR1AP10644 381 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 CDKN2BP42772 138 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 CCR10P46092 362 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 ARRB1P49407 418 aaPredicted RBP13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 CLCN7P51798 805 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 TMPRSS11AQ6ZMR5 421 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 TDHQ8IZJ6 230 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 OSBPL11Q9BXB4 747 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 SLC25A51Q9H1U9 297 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 FZD10Q9ULW2 581 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 KERAO60938 352 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 ADH1BP00325 375 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 ALOX5P09917 674 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 HLA-EP13747 358 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 NRG3P56975 720 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 HKDC1Q2TB90 917 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 REP15Q6BDI9 236 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 COX18Q8N8Q8 333 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 NDC1Q9BTX1 674 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 PNPLA3Q9NST1 481 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 NOX1Q9Y5S8 564 aa13.98□□□□□ -0.17
PCDHA11-201ENST00000398640 RIIAD1A6NNX1 92 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 TGFBR2P37173 567 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 RFTN2Q52LD8 501 aaPredicted RBP13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 DCST1Q5T197 706 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 Q6ZVU0 165 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 CPT1BQ92523 772 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 NKD1Q969G9 470 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 POP5Q969H6 163 aaKnown RBP13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 HAPLN3Q96S86 360 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 TMA7Q9Y2S6 64 aaKnown RBP13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 PCDHGA3Q9Y5H0 932 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 MYH3P11055 1940 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 hCG_2039718K7EN88 272 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 TFECO14948 347 aaPredicted RBP13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 GDI2P50395 445 aaKnown RBP13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 CERS6Q6ZMG9 384 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 LRRC17Q8N6Y2 441 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 OR5T3Q8NGG3 340 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 CHID1Q9BWS9 393 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 DMAC2Q9NW81 257 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 UGT2B11O75310 529 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 RPL10P27635 214 aaKnown RBP13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 IL12AP29459 219 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 GSTT1P30711 240 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 RFTN1Q14699 578 aaPredicted RBP13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 ZYG11AQ6WRX3 759 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 GPR151Q8TDV0 419 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 SPOCK2Q92563 424 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 ADAM7Q9H2U9 754 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 TMLHEQ9NVH6 421 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 HMGXB4Q9UGU5 601 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 MED31Q9Y3C7 131 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 BACE2Q9Y5Z0 518 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 MMP20O60882 483 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 GJB5O95377 273 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 KLK3P07288 261 aaPredicted RBP13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 ABATP80404 500 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 KLF10Q13118 480 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 ARHGAP40Q5TG30 622 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 TCEAL6Q6IPX3 200 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 GKN2Q86XP6 184 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 CIB1Q99828 191 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 TRIM39Q9HCM9 518 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 CTPS2Q9NRF8 586 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 WBP1LQ9NX94 342 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 PRPF19Q9UMS4 504 aaKnown RBP13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 ELOVL7A1L3X0 281 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 FAM149AA5PLN7 773 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 NEMP2A6NFY4 417 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 CCR3P51677 355 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 C6orf52Q5T4I8 152 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 TSTD2Q5T7W7 516 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 SLC25A36Q96CQ1 311 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 AGAP2Q99490 1192 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 TRMOQ9BU70 441 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 FAM192AQ9GZU8 254 aa13.97□□□□□ -0.17
PCDHA11-201ENST00000398640 DDX60Q8IY21 1712 aaKnown RBP13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 TGM5O43548 720 aa13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 NCK1P16333 377 aa13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 SLC7A1P30825 629 aa13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 TTKP33981 857 aa13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 UBAP2Q5T6F2 1119 aaKnown RBP13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 PAOXQ6QHF9 649 aa13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 CLIP4Q8N3C7 705 aa13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 FAM47BQ8NA70 645 aa13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 CLK4Q9HAZ1 481 aaKnown RBP13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 SLC2A4RGQ9NR83 387 aa13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 MARK1Q9P0L2 795 aa13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 TESMINQ9Y4I5 508 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms