RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 MATN1P21941 496 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 CRATP43155 626 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 ACADVLP49748 655 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 CHIT1Q13231 466 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 LCN8Q6JVE9 175 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 Q6ZSR9 355 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 BEND5Q7L4P6 421 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 PAGE2Q7Z2X7 111 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 C11orf96Q7Z7L8 435 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 ZNF419Q96HQ0 510 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 ZNF334Q9HCZ1 680 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 ZIM2Q9NZV7 527 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 IFRD1O00458 451 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 RFXANKO14593 260 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 MATN4O95460 622 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 MTHFD2P13995 350 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 SERPINA4P29622 427 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 HNF1BP35680 557 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 ZXDBP98169 803 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 SCRN3Q0VDG4 424 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 SPDYE7PQ495Y7 208 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 STX12Q86Y82 276 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 EPHX4Q8IUS5 362 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 TEX26Q8N6G2 289 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 NETO1Q8TDF5 533 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 BCL7CQ8WUZ0 217 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 MED8Q96G25 268 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 ITCHQ96J02 903 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 ZNF558Q96NG5 402 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 ANKRD60Q9BZ19 345 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 HMX1Q9NP08 348 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 SPG21Q9NZD8 308 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 VPS51Q9UID3 782 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 FBXL21Q9UKT6 434 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 DHRS7Q9Y394 339 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 OAS3Q9Y6K5 1087 aaKnown RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 ZNF99A8MXY4 864 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 CA12O43570 354 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 STC2O76061 302 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 PRAMEF12O95522 483 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 RFC2P35250 354 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 ILF2Q12905 390 aaKnown RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 SKIV2LQ15477 1246 aaKnown RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 CYP27C1Q4G0S4 372 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 XKR6Q5GH73 641 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 LETMD1Q6P1Q0 360 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 SLCO6A1Q86UG4 719 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 RBFAQ8N0V3 343 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 GPR150Q8NGU9 434 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 MCOLN3Q8TDD5 553 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 UTP15Q8TED0 518 aaKnown RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 TMEM169Q96HH4 297 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 SMG9Q9H0W8 520 aaKnown RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 DUS2Q9NX74 493 aaKnown RBP4.83□□□□□ -1.64
SMAD4-202ENST00000398417 SPASTQ9UBP0 616 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 CDC14AQ9UNH5 594 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 DYRK1BQ9Y463 629 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 GPR45Q9Y5Y3 372 aa4.83□□□□□ -1.64
SMAD4-202ENST00000398417 LCHNA4D1U4 455 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 K7EPI3 171 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 FFAR2O15552 330 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 INHAP05111 366 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 RPLP2P05387 115 aaKnown RBP4.82□□□□□ -1.64
SMAD4-202ENST00000398417 GRM2Q14416 872 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 SYT16Q17RD7 645 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 PLEKHN1Q494U1 663 aaPredicted RBP4.82□□□□□ -1.64
SMAD4-202ENST00000398417 ANKRD26P1Q6NSI1 321 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 ADCK2Q7Z695 626 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 FRS2Q8WU20 508 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 DPF1Q92782 380 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 PHB2Q99623 299 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 CORO1BQ9BR76 489 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 SEZ6LQ9BYH1 1024 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 TLR9Q9NR96 1032 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 MARCH5Q9NX47 278 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 EMC3Q9P0I2 261 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 UTS2RQ9UKP6 389 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.82□□□□□ -1.64
SMAD4-202ENST00000398417 OR2AG2A6NM03 316 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 NDUFS2O75306 463 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 RPIAP49247 311 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 NFKB2Q00653 900 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 IFI44LQ53G44 452 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 CYP2U1Q7Z449 544 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 ZFAND4Q86XD8 727 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 SYTL1Q8IYJ3 562 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 TTC29Q8NA56 475 aaPredicted RBP4.82□□□□□ -1.64
SMAD4-202ENST00000398417 BORCS5Q969J3 196 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 PANX1Q96RD7 426 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 LRRC3Q9BY71 257 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 SLC2A11Q9BYW1 496 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 LTB4R2Q9NPC1 389 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 OLAHQ9NV23 265 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 ADPRHL2Q9NX46 363 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 B4GALT6Q9UBX8 382 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 BOLA2-SMG1P6H3BVE0 249 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 FABP3P05413 133 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 FGF4P08620 206 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 SLC10A3P09131 477 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 ALDH3B2P48448 385 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms