RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 FOXJ2Q9P0K8 574 aa24.73■■□□□ 1.55
U2AF1-203ENST00000398137 TMEM9Q9P0T7 183 aa24.73■■□□□ 1.55
U2AF1-203ENST00000398137 ASF1AQ9Y294 204 aa24.73■■□□□ 1.55
U2AF1-203ENST00000398137 BAHCC1Q9P281 2608 aa24.73■■□□□ 1.55
U2AF1-203ENST00000398137 C9orf172C9J069 976 aa24.72■■□□□ 1.55
U2AF1-203ENST00000398137 NVLO15381 856 aaKnown RBP24.72■■□□□ 1.55
U2AF1-203ENST00000398137 PRAMEF10O60809 474 aa24.72■■□□□ 1.55
U2AF1-203ENST00000398137 TUBBP07437 444 aa24.72■■□□□ 1.55
U2AF1-203ENST00000398137 INHBAP08476 426 aa24.72■■□□□ 1.55
U2AF1-203ENST00000398137 JMJD7P0C870 316 aa24.72■■□□□ 1.55
U2AF1-203ENST00000398137 CD9P21926 228 aa24.72■■□□□ 1.55
U2AF1-203ENST00000398137 SKIV2L2P42285 1042 aaKnown RBP24.72■■□□□ 1.55
U2AF1-203ENST00000398137 VAC14Q08AM6 782 aa24.72■■□□□ 1.55
U2AF1-203ENST00000398137 SRSF6Q13247 344 aaKnown RBP24.72■■□□□ 1.55
U2AF1-203ENST00000398137 BMPR2Q13873 1038 aa24.72■■□□□ 1.55
U2AF1-203ENST00000398137 GPR18Q14330 331 aa24.72■■□□□ 1.55
U2AF1-203ENST00000398137 ZNF460Q14592 562 aa24.72■■□□□ 1.55
U2AF1-203ENST00000398137 OR5AR1Q8NGP9 310 aa24.72■■□□□ 1.55
U2AF1-203ENST00000398137 JPH3Q8WXH2 748 aaPredicted RBP24.72■■□□□ 1.55
U2AF1-203ENST00000398137 FERD3LQ96RJ6 166 aa24.72■■□□□ 1.55
U2AF1-203ENST00000398137 SLC38A3Q99624 504 aa24.72■■□□□ 1.55
U2AF1-203ENST00000398137 HGH1Q9BTY7 390 aa24.72■■□□□ 1.55
U2AF1-203ENST00000398137 IKBKGQ9Y6K9 419 aa24.72■■□□□ 1.55
U2AF1-203ENST00000398137 K7ENP7 123 aa24.71■■□□□ 1.55
U2AF1-203ENST00000398137 CCL4P13236 92 aa24.71■■□□□ 1.55
U2AF1-203ENST00000398137 HSD17B3P37058 310 aa24.71■■□□□ 1.55
U2AF1-203ENST00000398137 SLC12A2P55011 1212 aa24.71■■□□□ 1.55
U2AF1-203ENST00000398137 POU4F1Q01851 419 aa24.71■■□□□ 1.55
U2AF1-203ENST00000398137 USP10Q14694 798 aaKnown RBP24.71■■□□□ 1.55
U2AF1-203ENST00000398137 CLPPQ16740 277 aaPredicted RBP24.71■■□□□ 1.55
U2AF1-203ENST00000398137 INO80CQ6PI98 192 aaPredicted RBP24.71■■□□□ 1.55
U2AF1-203ENST00000398137 TMEM26Q6ZUK4 368 aa24.71■■□□□ 1.55
U2AF1-203ENST00000398137 PIWIL4Q7Z3Z4 852 aaKnown RBP24.71■■□□□ 1.55
U2AF1-203ENST00000398137 CEP97Q8IW35 865 aa24.71■■□□□ 1.55
U2AF1-203ENST00000398137 SH3KBP1Q96B97 665 aa24.71■■□□□ 1.55
U2AF1-203ENST00000398137 CCDC74BQ96LY2 380 aa24.71■■□□□ 1.55
U2AF1-203ENST00000398137 CMKLR1Q99788 373 aa24.71■■□□□ 1.55
U2AF1-203ENST00000398137 MVB12BQ9H7P6 319 aa24.71■■□□□ 1.55
U2AF1-203ENST00000398137 NFS1Q9Y697 457 aa24.71■■□□□ 1.55
U2AF1-203ENST00000398137 KALRNO60229 2985 aa24.7■■□□□ 1.55
U2AF1-203ENST00000398137 SDK2Q58EX2 2172 aa24.7■■□□□ 1.55
U2AF1-203ENST00000398137 MSH2P43246 934 aa24.7■■□□□ 1.54
U2AF1-203ENST00000398137 RBM12BQ8IXT5 1001 aaKnown RBP24.7■■□□□ 1.54
U2AF1-203ENST00000398137 DCAKDQ8WVC6 231 aa24.7■■□□□ 1.54
U2AF1-203ENST00000398137 TTC9Q92623 222 aa24.7■■□□□ 1.54
U2AF1-203ENST00000398137 USP7Q93009 1102 aa24.7■■□□□ 1.54
U2AF1-203ENST00000398137 PMEPA1Q969W9 287 aa24.7■■□□□ 1.54
U2AF1-203ENST00000398137 LINGO1Q96FE5 620 aa24.7■■□□□ 1.54
U2AF1-203ENST00000398137 TBC1D10AQ9BXI6 508 aa24.7■■□□□ 1.54
U2AF1-203ENST00000398137 KIR3DX1Q9H7L2 352 aa24.7■■□□□ 1.54
U2AF1-203ENST00000398137 KCNK4Q9NYG8 393 aa24.7■■□□□ 1.54
U2AF1-203ENST00000398137 COLEC10Q9Y6Z7 277 aa24.7■■□□□ 1.54
U2AF1-203ENST00000398137 LILRA5A6NI73 299 aa24.69■■□□□ 1.54
U2AF1-203ENST00000398137 TK2O00142 265 aa24.69■■□□□ 1.54
U2AF1-203ENST00000398137 PHGDHO43175 533 aaKnown RBP24.69■■□□□ 1.54
U2AF1-203ENST00000398137 SHBGP04278 402 aa24.69■■□□□ 1.54
U2AF1-203ENST00000398137 CBSLP0DN79 551 aa24.69■■□□□ 1.54
U2AF1-203ENST00000398137 ENO3P13929 434 aaPredicted RBP24.69■■□□□ 1.54
U2AF1-203ENST00000398137 MPSTP25325 297 aa24.69■■□□□ 1.54
U2AF1-203ENST00000398137 NDUFS1P28331 727 aa24.69■■□□□ 1.54
U2AF1-203ENST00000398137 CBSP35520 551 aa24.69■■□□□ 1.54
U2AF1-203ENST00000398137 MAPK9P45984 424 aa24.69■■□□□ 1.54
U2AF1-203ENST00000398137 BDKRB1P46663 353 aa24.69■■□□□ 1.54
U2AF1-203ENST00000398137 RGS4P49798 205 aa24.69■■□□□ 1.54
U2AF1-203ENST00000398137 PRKG2Q13237 762 aa24.69■■□□□ 1.54
U2AF1-203ENST00000398137 PLCL1Q15111 1095 aa24.69■■□□□ 1.54
U2AF1-203ENST00000398137 MROH9Q5TGP6 573 aa24.69■■□□□ 1.54
U2AF1-203ENST00000398137 UNC5DQ6UXZ4 953 aa24.69■■□□□ 1.54
U2AF1-203ENST00000398137 LSM14AQ8ND56 463 aaKnown RBP24.69■■□□□ 1.54
U2AF1-203ENST00000398137 OR4D9Q8NGE8 314 aa24.69■■□□□ 1.54
U2AF1-203ENST00000398137 EEF1AKMT1Q8WVE0 214 aa24.69■■□□□ 1.54
U2AF1-203ENST00000398137 TSPAN17Q96FV3 270 aa24.69■■□□□ 1.54
U2AF1-203ENST00000398137 LDHAL6BQ9BYZ2 381 aaPredicted RBP24.69■■□□□ 1.54
U2AF1-203ENST00000398137 TRIT1Q9H3H1 467 aaKnown RBP24.69■■□□□ 1.54
U2AF1-203ENST00000398137 UCK1Q9HA47 277 aa24.69■■□□□ 1.54
U2AF1-203ENST00000398137 SLC24A2Q9UI40 661 aa24.69■■□□□ 1.54
U2AF1-203ENST00000398137 MPC1LP0DKB6 136 aa24.68■■□□□ 1.54
U2AF1-203ENST00000398137 THRAP10827 490 aa24.68■■□□□ 1.54
U2AF1-203ENST00000398137 FGF3P11487 239 aaPredicted RBP24.68■■□□□ 1.54
U2AF1-203ENST00000398137 ZNF37AP17032 561 aaPredicted RBP24.68■■□□□ 1.54
U2AF1-203ENST00000398137 PPM1FP49593 454 aaPredicted RBP24.68■■□□□ 1.54
U2AF1-203ENST00000398137 MAPK10P53779 464 aa24.68■■□□□ 1.54
U2AF1-203ENST00000398137 TMEM207Q6UWW9 146 aa24.68■■□□□ 1.54
U2AF1-203ENST00000398137 NEK10Q6ZWH5 1172 aa24.68■■□□□ 1.54
U2AF1-203ENST00000398137 TAOK1Q7L7X3 1001 aa24.68■■□□□ 1.54
U2AF1-203ENST00000398137 CMC1Q7Z7K0 106 aa24.68■■□□□ 1.54
U2AF1-203ENST00000398137 ZFAND4Q86XD8 727 aa24.68■■□□□ 1.54
U2AF1-203ENST00000398137 OR5K2Q8NHB8 316 aa24.68■■□□□ 1.54
U2AF1-203ENST00000398137 FOPNLQ96NB1 174 aa24.68■■□□□ 1.54
U2AF1-203ENST00000398137 PDP2Q9P2J9 529 aa24.68■■□□□ 1.54
U2AF1-203ENST00000398137 TDRKHQ9Y2W6 561 aaKnown RBP24.68■■□□□ 1.54
U2AF1-203ENST00000398137 HMX2A2RU54 273 aa24.67■■□□□ 1.54
U2AF1-203ENST00000398137 ERVH48-1M5A8F1 160 aa24.67■■□□□ 1.54
U2AF1-203ENST00000398137 EIF3FO00303 357 aaPredicted RBP24.67■■□□□ 1.54
U2AF1-203ENST00000398137 HGSO14964 777 aaPredicted RBP24.67■■□□□ 1.54
U2AF1-203ENST00000398137 TSPAN12O95859 305 aa24.67■■□□□ 1.54
U2AF1-203ENST00000398137 STMN1P16949 149 aa24.67■■□□□ 1.54
U2AF1-203ENST00000398137 GCAP28676 217 aa24.67■■□□□ 1.54
U2AF1-203ENST00000398137 SERPINB9P50453 376 aa24.67■■□□□ 1.54
U2AF1-203ENST00000398137 IL2P60568 153 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms