RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 TNNT1P13805 278 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 COMTP21964 271 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 OTX2P32243 289 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 ADRA1AP35348 466 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 CBSP35520 551 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 LMAN1P49257 510 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 RAPSNQ13702 412 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 BOP1Q14137 746 aaKnown RBP8.46□□□□□ -1.06
CAPN3-208ENST00000397204 TRIM14Q14142 442 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 KYNUQ16719 465 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 TFDP3Q5H9I0 405 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 KAZNQ674X7 775 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 RHBDD2Q6NTF9 364 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 CAVIN1Q6NZI2 390 aaKnown RBP8.46□□□□□ -1.06
CAPN3-208ENST00000397204 LYPD4Q6UWN0 246 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 Q6ZS92 163 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 CDHR3Q6ZTQ4 885 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 SNX20Q7Z614 316 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 MRGPREQ86SM8 312 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 TICAM1Q8IUC6 712 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 NXPE1Q8N323 547 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 OR52E1Q8NGJ3 308 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 OR2Y1Q8NGV0 311 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 PROKR1Q8TCW9 393 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 QKIQ96PU8 341 aaKnown RBP eCLIP8.46□□□□□ -1.06
CAPN3-208ENST00000397204 AP1M1Q9BXS5 423 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 TSPAN10Q9H1Z9 355 aaPredicted RBP8.46□□□□□ -1.06
CAPN3-208ENST00000397204 COG4Q9H9E3 785 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 VPS37BQ9H9H4 285 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 AGPAT4Q9NRZ5 378 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 P4HTMQ9NXG6 502 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 RSPH14Q9UHP6 348 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 CRLS1Q9UJA2 301 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 PTRH2Q9Y3E5 179 aaKnown RBP8.46□□□□□ -1.06
CAPN3-208ENST00000397204 ALG6Q9Y672 507 aa8.46□□□□□ -1.06
CAPN3-208ENST00000397204 ZNF106Q9H2Y7 1883 aaKnown RBP8.46□□□□□ -1.06
CAPN3-208ENST00000397204 PIKFYVEQ9Y2I7 2098 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 IGLV3-16A0A075B6K0 115 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 A0A1W2PNR3 127 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 F5H423 210 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-208ENST00000397204 H3BMH7 237 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 PSTPIP1O43586 416 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 PVRP15151 417 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 ITGALP20701 1170 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 PDHA2P29803 388 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 FOLR3P41439 243 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 GLRBP48167 497 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 HADHBP55084 474 aaKnown RBP8.45□□□□□ -1.06
CAPN3-208ENST00000397204 PRKG2Q13237 762 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 MSLNQ13421 630 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-208ENST00000397204 PRPSAP1Q14558 356 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 LLGL1Q15334 1064 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 ZNF658BQ4V348 819 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-208ENST00000397204 ITPRIPL1Q6GPH6 555 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 TLDC1Q6P9B6 456 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 SPESP1Q6UW49 350 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 KATNAL2Q8IYT4 538 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 COG1Q8WTW3 980 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 NAT14Q8WUY8 206 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 GBP5Q96PP8 586 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 RANBP9Q96S59 729 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 CHP1Q99653 195 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 FICDQ9BVA6 458 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 SPRTNQ9H040 489 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-208ENST00000397204 ILKAPQ9H0C8 392 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-208ENST00000397204 GBA3Q9H227 469 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 NHEJ1Q9H9Q4 299 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-208ENST00000397204 ARNT2Q9HBZ2 717 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 FAM60AQ9NP50 221 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 ZDHHC3Q9NYG2 299 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 ACTR10Q9NZ32 417 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 IFT80Q9P2H3 777 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-208ENST00000397204 NDOR1Q9UHB4 597 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 POLG2Q9UHN1 485 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 FEZ2Q9UHY8 353 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-208ENST00000397204 ZNF232Q9UNY5 417 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 SRPK3Q9UPE1 567 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 HYOU1Q9Y4L1 999 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 OTOGQ6ZRI0 2925 aa8.45□□□□□ -1.06
CAPN3-208ENST00000397204 CSMD1Q96PZ7 3565 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 hCG_1818297A0A087WSY0 165 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 TRBV5-4A0A0C4DH59 114 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 H7C0C1 242 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 APOC4-APOC2K7ER74 178 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 QSOX1O00391 747 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 AP2A2O94973 939 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 APOC2P02655 101 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 TPM1P09493 284 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 RBL1P28749 1068 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 SHMT2P34897 504 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 ATP5OP48047 213 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 GABRA4P48169 554 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 AIMP2Q13155 320 aaKnown RBP8.44□□□□□ -1.06
CAPN3-208ENST00000397204 CYP2A13Q16696 494 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 NKAIN1Q4KMZ8 207 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 DENND5AQ6IQ26 1287 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 UNC5AQ6ZN44 842 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 BBS12Q6ZW61 710 aa8.44□□□□□ -1.06
CAPN3-208ENST00000397204 C19orf47Q8N9M1 422 aaKnown RBP8.44□□□□□ -1.06
CAPN3-208ENST00000397204 ST6GALNAC3Q8NDV1 305 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms