RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 SRP72O76094 671 aaKnown RBP8.09□□□□□ -1.11
SCFD1-202ENST00000396629 CLDN14O95500 239 aa8.09□□□□□ -1.11
SCFD1-202ENST00000396629 CRYABP02511 175 aaKnown RBP8.09□□□□□ -1.11
SCFD1-202ENST00000396629 ALAS2P22557 587 aa8.09□□□□□ -1.11
SCFD1-202ENST00000396629 PDHA2P29803 388 aa8.09□□□□□ -1.11
SCFD1-202ENST00000396629 SHMT2P34897 504 aa8.09□□□□□ -1.11
SCFD1-202ENST00000396629 TLE4Q04727 773 aa8.09□□□□□ -1.11
SCFD1-202ENST00000396629 RBPJQ06330 500 aa8.09□□□□□ -1.11
SCFD1-202ENST00000396629 RPA4Q13156 261 aa8.09□□□□□ -1.11
SCFD1-202ENST00000396629 PRKG2Q13237 762 aa8.09□□□□□ -1.11
SCFD1-202ENST00000396629 CDSNQ15517 529 aa8.09□□□□□ -1.11
SCFD1-202ENST00000396629 NPNTQ6UXI9 565 aa8.09□□□□□ -1.11
SCFD1-202ENST00000396629 TTLL10Q6ZVT0 673 aa8.09□□□□□ -1.11
SCFD1-202ENST00000396629 VSIG1Q86XK7 387 aa8.09□□□□□ -1.11
SCFD1-202ENST00000396629 FAM20CQ8IXL6 584 aa8.09□□□□□ -1.11
SCFD1-202ENST00000396629 ADAMTS18Q8TE60 1221 aa8.09□□□□□ -1.11
SCFD1-202ENST00000396629 TFGQ92734 400 aaPredicted RBP8.09□□□□□ -1.11
SCFD1-202ENST00000396629 DCUN1D1Q96GG9 259 aa8.09□□□□□ -1.11
SCFD1-202ENST00000396629 TREX2Q9BQ50 279 aaPredicted RBP8.09□□□□□ -1.11
SCFD1-202ENST00000396629 HGH1Q9BTY7 390 aa8.09□□□□□ -1.11
SCFD1-202ENST00000396629 ENKD1Q9H0I2 346 aa8.09□□□□□ -1.11
SCFD1-202ENST00000396629 SOX17Q9H6I2 414 aaPredicted RBP8.09□□□□□ -1.11
SCFD1-202ENST00000396629 ENAMQ9NRM1 1142 aa8.09□□□□□ -1.11
SCFD1-202ENST00000396629 SPHK1Q9NYA1 384 aa8.09□□□□□ -1.11
SCFD1-202ENST00000396629 EURLQ9NYK6 297 aa8.09□□□□□ -1.11
SCFD1-202ENST00000396629 PLA2G3Q9NZ20 509 aa8.09□□□□□ -1.11
SCFD1-202ENST00000396629 NXT1Q9UKK6 140 aaKnown RBP8.09□□□□□ -1.11
SCFD1-202ENST00000396629 DYTNA2CJ06 578 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 C3orf70A6NLC5 250 aaPredicted RBP8.08□□□□□ -1.12
SCFD1-202ENST00000396629 APOL1O14791 398 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 USP1O94782 785 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 CHRM5P08912 532 aaPredicted RBP8.08□□□□□ -1.12
SCFD1-202ENST00000396629 RALBP11234 206 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 ATP1B2P14415 290 aaPredicted RBP8.08□□□□□ -1.12
SCFD1-202ENST00000396629 NFKB1P19838 968 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 XIAPP98170 497 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 YOD1Q5VVQ6 348 aaPredicted RBP8.08□□□□□ -1.12
SCFD1-202ENST00000396629 RBM43Q6ZSC3 357 aaKnown RBP8.08□□□□□ -1.12
SCFD1-202ENST00000396629 KBTBD2Q8IY47 623 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 HEXDCQ8WVB3 486 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 CHTF18Q8WVB6 975 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.08□□□□□ -1.12
SCFD1-202ENST00000396629 ULK4Q96C45 1275 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 TMUB1Q9BVT8 246 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 IRAK4Q9NWZ3 460 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 SH3BGRL2Q9UJC5 107 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 ZNF835Q9Y2P0 537 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 A0A1B0GTL3 188 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 RASAL1O95294 804 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 TPBGLP0DKB5 382 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 ZFXP17010 805 aaPredicted RBP8.08□□□□□ -1.12
SCFD1-202ENST00000396629 FDXRP22570 491 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 PEBP1P30086 187 aaKnown RBP8.08□□□□□ -1.12
SCFD1-202ENST00000396629 CARSP49589 748 aaKnown RBP8.08□□□□□ -1.12
SCFD1-202ENST00000396629 CASP6P55212 293 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 FANCCQ00597 558 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 WASHC5Q12768 1159 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 TAF1AQ15573 450 aaPredicted RBP8.08□□□□□ -1.12
SCFD1-202ENST00000396629 C3AR1Q16581 482 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 ATG9BQ674R7 924 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 ZNF449Q6P9G9 518 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 Q6ZPB1 254 aaPredicted RBP8.08□□□□□ -1.12
SCFD1-202ENST00000396629 SHISA6Q6ZSJ9 500 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 MCATQ8IVS2 390 aaKnown RBP8.08□□□□□ -1.12
SCFD1-202ENST00000396629 CEP97Q8IW35 865 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 OXNAD1Q96HP4 312 aaPredicted RBP8.08□□□□□ -1.12
SCFD1-202ENST00000396629 FCRL5Q96RD9 977 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 MESP1Q9BRJ9 268 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 ZNF160Q9HCG1 818 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 IL1RAPL1Q9NZN1 696 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 OR6C2Q9NZP2 312 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 PTGFRNQ9P2B2 879 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 CTSFQ9UBX1 484 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 FKBPLQ9UIM3 349 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 ARL5AQ9Y689 179 aa8.08□□□□□ -1.12
SCFD1-202ENST00000396629 NIPBLQ6KC79 2804 aaeCLIP8.07□□□□□ -1.12
SCFD1-202ENST00000396629 IGLV3-16A0A075B6K0 115 aa8.07□□□□□ -1.12
SCFD1-202ENST00000396629 CFAP99D6REC4 459 aa8.07□□□□□ -1.12
SCFD1-202ENST00000396629 SLC19A2O60779 497 aa8.07□□□□□ -1.12
SCFD1-202ENST00000396629 WISP2O76076 250 aa8.07□□□□□ -1.12
SCFD1-202ENST00000396629 PRR35P0CG20 571 aa8.07□□□□□ -1.12
SCFD1-202ENST00000396629 ESRRAP11474 423 aaPredicted RBP8.07□□□□□ -1.12
SCFD1-202ENST00000396629 TNNT3P45378 269 aaPredicted RBP8.07□□□□□ -1.12
SCFD1-202ENST00000396629 MPP3Q13368 585 aa8.07□□□□□ -1.12
SCFD1-202ENST00000396629 TBC1D21Q8IYX1 336 aa8.07□□□□□ -1.12
SCFD1-202ENST00000396629 MMP21Q8N119 569 aa8.07□□□□□ -1.12
SCFD1-202ENST00000396629 OR4K2Q8NGD2 314 aa8.07□□□□□ -1.12
SCFD1-202ENST00000396629 OR5AR1Q8NGP9 310 aa8.07□□□□□ -1.12
SCFD1-202ENST00000396629 CCDC110Q8TBZ0 833 aa8.07□□□□□ -1.12
SCFD1-202ENST00000396629 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.07□□□□□ -1.12
SCFD1-202ENST00000396629 ZNF285Q96NJ3 590 aa8.07□□□□□ -1.12
SCFD1-202ENST00000396629 COPS8Q99627 209 aa8.07□□□□□ -1.12
SCFD1-202ENST00000396629 MAK16Q9BXY0 300 aaKnown RBP8.07□□□□□ -1.12
SCFD1-202ENST00000396629 RNF32Q9H0A6 362 aa8.07□□□□□ -1.12
SCFD1-202ENST00000396629 CUTCQ9NTM9 273 aa8.07□□□□□ -1.12
SCFD1-202ENST00000396629 ANO10Q9NW15 660 aa8.07□□□□□ -1.12
SCFD1-202ENST00000396629 POLG2Q9UHN1 485 aa8.07□□□□□ -1.12
SCFD1-202ENST00000396629 LCMT1Q9UIC8 334 aa8.07□□□□□ -1.12
SCFD1-202ENST00000396629 CRLS1Q9UJA2 301 aa8.07□□□□□ -1.12
SCFD1-202ENST00000396629 MRPS2Q9Y399 296 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms