RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 TNKS2Q9H2K2 1166 aa15.33■□□□□ 0.05
GNE-202ENST00000396594 ZNF446Q9NWS9 450 aa15.33■□□□□ 0.05
GNE-202ENST00000396594 SLC7A1P30825 629 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 ACTR1BP42025 376 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 CBX5P45973 191 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 ADARP55265 1226 aaKnown RBP15.33■□□□□ 0.04
GNE-202ENST00000396594 TAS2R39P59534 338 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 CDKL4Q5MAI5 379 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 GK5Q6ZS86 529 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 KIAA1191Q96A73 305 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 IGSF21Q96ID5 467 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 MVB12BQ9H7P6 319 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 IL23AQ9NPF7 189 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 PAK6Q9NQU5 681 aaPredicted RBP15.33■□□□□ 0.04
GNE-202ENST00000396594 ING3Q9NXR8 418 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 HS3ST4Q9Y661 456 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 HLA-DQB2P05538 268 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 C1QTNF8P60827 252 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 PPP3R1P63098 170 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 SLC18A2Q05940 514 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 NRF1Q16656 503 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 SLC9B1Q4ZJI4 515 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 TRAM1L1Q8N609 369 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 ZNF516Q92618 1163 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 DENND2DQ9H6A0 471 aaPredicted RBP15.33■□□□□ 0.04
GNE-202ENST00000396594 ARL8BQ9NVJ2 186 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 KIF13AQ9H1H9 1805 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.33■□□□□ 0.04
GNE-202ENST00000396594 AK1P00568 194 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 XAGE5Q8WWM1 108 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 DGCR6LQ9BY27 220 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 TMEM59LQ9UK28 342 aa15.33■□□□□ 0.04
GNE-202ENST00000396594 KHDRBS3O75525 346 aaKnown RBP15.32■□□□□ 0.04
GNE-202ENST00000396594 WBP4O75554 376 aaKnown RBP15.32■□□□□ 0.04
GNE-202ENST00000396594 CYP11A1P05108 521 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 SAGP10523 405 aaPredicted RBP15.32■□□□□ 0.04
GNE-202ENST00000396594 PIGWQ7Z7B1 504 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 FAM124AQ86V42 546 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 CACUL1Q86Y37 369 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 FAM174AQ8TBP5 190 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 C17orf62Q9BQA9 187 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 GRIP2Q9C0E4 1043 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 POFUT2Q9Y2G5 429 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 ANKRD66B4E2M5 251 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 OR4F21O95013 312 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 TAF5Q15542 800 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 PUS10Q3MIT2 529 aaKnown RBP15.32■□□□□ 0.04
GNE-202ENST00000396594 FRG2Q64ET8 278 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 TCEAL6Q6IPX3 200 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 TMEM145Q8NBT3 493 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 LRRN4CLQ8ND94 238 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 LPGAT1Q92604 370 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 FRG2BQ96QU4 278 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 RMI1Q9H9A7 625 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 ZDHHC18Q9NUE0 388 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 A0A1W2PRB8 838 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 RCBTB2O95199 551 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 CLCN4P51793 760 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 LDLRAD1Q5T700 205 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 LIPJQ5W064 366 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 SLC29A4Q7RTT9 530 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 C12orf40Q86WS4 652 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 SIDT2Q8NBJ9 832 aaKnown RBP15.32■□□□□ 0.04
GNE-202ENST00000396594 NMUR2Q9GZQ4 415 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 SH3PXD2BA1X283 911 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 PSMD11O00231 422 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 PIP5K1BO14986 540 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 PROZP22891 400 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 SLC11A1P49279 550 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 RHAGQ02094 409 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 SIRPB2Q5JXA9 342 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 ADNP2Q6IQ32 1131 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 NPLOC4Q8TAT6 608 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 SCGB3A2Q96PL1 93 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 FLRT1Q9NZU1 646 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 SEC14L4Q9UDX3 406 aa15.32■□□□□ 0.04
GNE-202ENST00000396594 TTLL8A6PVC2 850 aa15.31■□□□□ 0.04
GNE-202ENST00000396594 NBNO60934 754 aa15.31■□□□□ 0.04
GNE-202ENST00000396594 RSL1D1O76021 490 aaKnown RBP15.31■□□□□ 0.04
GNE-202ENST00000396594 NFKB2Q00653 900 aa15.31■□□□□ 0.04
GNE-202ENST00000396594 ANKRD22Q5VYY1 191 aa15.31■□□□□ 0.04
GNE-202ENST00000396594 RHEBL1Q8TAI7 183 aa15.31■□□□□ 0.04
GNE-202ENST00000396594 SETD7Q8WTS6 366 aaKnown RBP15.31■□□□□ 0.04
GNE-202ENST00000396594 EXOSC8Q96B26 276 aaKnown RBP15.31■□□□□ 0.04
GNE-202ENST00000396594 NPAS2Q99743 824 aa15.31■□□□□ 0.04
GNE-202ENST00000396594 IGKV6D-21A0A0A0MT36 114 aa15.31■□□□□ 0.04
GNE-202ENST00000396594 HAS3O00219 553 aa15.31■□□□□ 0.04
GNE-202ENST00000396594 NME6O75414 186 aaPredicted RBP15.31■□□□□ 0.04
GNE-202ENST00000396594 LRATO95237 230 aa15.31■□□□□ 0.04
GNE-202ENST00000396594 C7P10643 843 aa15.31■□□□□ 0.04
GNE-202ENST00000396594 SPATA22Q8NHS9 363 aa15.31■□□□□ 0.04
GNE-202ENST00000396594 ASB9Q96DX5 294 aa15.31■□□□□ 0.04
GNE-202ENST00000396594 CREBZFQ9NS37 354 aa15.31■□□□□ 0.04
GNE-202ENST00000396594 IGKV6-21A0A0C4DH24 114 aa15.31■□□□□ 0.04
GNE-202ENST00000396594 WASHC1A8K0Z3 465 aa15.31■□□□□ 0.04
GNE-202ENST00000396594 ARHGEF33A8MVX0 844 aa15.31■□□□□ 0.04
GNE-202ENST00000396594 WASH3PC4AMC7 463 aa15.31■□□□□ 0.04
GNE-202ENST00000396594 H0YGN5 161 aa15.31■□□□□ 0.04
GNE-202ENST00000396594 SCAMP3O14828 347 aaKnown RBP15.31■□□□□ 0.04
GNE-202ENST00000396594 ZNF823P16415 610 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms