RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 HDCP19113 662 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 MAP4P27816 1152 aaKnown RBP5.25□□□□□ -1.57
VPS41-203ENST00000395969 POLR2IP36954 125 aaKnown RBP5.25□□□□□ -1.57
VPS41-203ENST00000395969 CLCNKAP51800 687 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 CDKN2DP55273 166 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 ERVFC1P60507 584 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 SMAD3P84022 425 aaKnown RBP5.25□□□□□ -1.57
VPS41-203ENST00000395969 FUT11Q495W5 492 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 CARD16Q5EG05 197 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 C6orf10Q5SRN2 563 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 KIAA1841Q6NSI8 718 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 C22orf39Q6P5X5 142 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 TPGS1Q6ZTW0 290 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 USP51Q70EK9 711 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 ERMP1Q7Z2K6 904 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 TRIM46Q7Z4K8 759 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 SPATA19Q7Z5L4 167 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 GPR149Q86SP6 731 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 C11orf74Q86VG3 221 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 TRAM1L1Q8N609 369 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 LSM14AQ8ND56 463 aaKnown RBP5.25□□□□□ -1.57
VPS41-203ENST00000395969 FAM156AQ8NDB6 213 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 IPMKQ8NFU5 416 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 CD200R1Q8TD46 325 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 HDAC2Q92769 488 aaKnown RBP5.25□□□□□ -1.57
VPS41-203ENST00000395969 ELSPBP1Q96BH3 223 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 ANAPC16Q96DE5 110 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 COQ10AQ96MF6 247 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 PGLYRP2Q96PD5 576 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 YME1L1Q96TA2 773 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 NTMT1Q9BV86 223 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 SLC29A3Q9BZD2 475 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 PITHD1Q9GZP4 211 aaPredicted RBP5.25□□□□□ -1.57
VPS41-203ENST00000395969 HEBP1Q9NRV9 189 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 CXXC1Q9P0U4 656 aaPredicted RBP5.25□□□□□ -1.57
VPS41-203ENST00000395969 ABCD2Q9UBJ2 740 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 SLC2A6Q9UGQ3 507 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 POLG2Q9UHN1 485 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 CCL27Q9Y4X3 112 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 TNPO3Q9Y5L0 923 aaKnown RBP5.25□□□□□ -1.57
VPS41-203ENST00000395969 C17orf113A0A1B0GUU1 675 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 A0A1W2PPC1 479 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 A8MT66 165 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 C3orf80F5H4A9 247 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 CFLARO15519 480 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 SCO2O43819 266 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 NOL3O60936 208 aaKnown RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 TMCC2O75069 709 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 GUCY1B2O75343 617 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 ECI2O75521 394 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 SLCO2B1O94956 709 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 CXCL14O95715 111 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 IFI6P09912 130 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 MBL2P11226 248 aaPredicted RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 GLULP15104 373 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 CSKP41240 450 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 CCR2P41597 374 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 PIK3CGP48736 1102 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 ARPP19P56211 112 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 RPS24P62847 133 aaKnown RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 POLR2LP62875 67 aaKnown RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 PRAMEP78395 509 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 CHRNEQ04844 493 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 SMAD1Q15797 465 aaKnown RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 PTPRNQ16849 979 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 HENMT1Q5T8I9 393 aaKnown RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 SDHAF4Q5VUM1 108 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 XAF1Q6GPH4 301 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 C16orf54Q6UWD8 224 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 ABRAXAS1Q6UWZ7 409 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 PLEKHG7Q6ZR37 379 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 RFPL4BQ6ZWI9 263 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 PTAR1Q7Z6K3 402 aaPredicted RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 BPHLQ86WA6 291 aaPredicted RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 CAMK1DQ8IU85 385 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 PARP8Q8N3A8 854 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 CLIP4Q8N3C7 705 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 TDRD5Q8NAT2 981 aaKnown RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 TXNDC5Q8NBS9 432 aaKnown RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 STAG3L4Q8TBR4 150 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 FKBP10Q96AY3 582 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 ROPN1LQ96C74 230 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 ZNF486Q96H40 463 aaPredicted RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 MED30Q96HR3 178 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 B3GALT6Q96L58 329 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 SH3GL1Q99961 368 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 SIK2Q9H0K1 926 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 HMG20AQ9NP66 347 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 C8orf4Q9NR00 106 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 TDP1Q9NUW8 608 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 CRNNQ9UBG3 495 aaPredicted RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 PFDN2Q9UHV9 154 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 TLK1Q9UKI8 766 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 ATP11BQ9Y2G3 1177 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 AP3M1Q9Y2T2 418 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 VSTM5A8MXK1 200 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 M0QX08 132 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 PRRG1O14668 218 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 TBL1XO60907 577 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 SOAT2O75908 522 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms