RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 SRP72O76094 671 aaKnown RBP11.33□□□□□ -0.6
SOD1-202ENST00000389995 PROSCO94903 275 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 NADKO95544 446 aaPredicted RBP11.33□□□□□ -0.6
SOD1-202ENST00000389995 CD63P08962 238 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 TPBGLP0DKB5 382 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 MCM3P25205 808 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 PBX1P40424 430 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 CA7P43166 264 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 OLIG2Q13516 323 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 PDK1Q15118 436 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 NFKBIBQ15653 356 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 SLC1A5Q15758 541 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 SLC14A2Q15849 920 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 RBBP7Q16576 425 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 SLC9A4Q6AI14 798 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 RPUSD3Q6P087 351 aaKnown RBP11.33□□□□□ -0.6
SOD1-202ENST00000389995 NCCRP1Q6ZVX7 275 aaPredicted RBP11.33□□□□□ -0.6
SOD1-202ENST00000389995 OVCH1Q7RTY7 1134 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 PRSS58Q8IYP2 241 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 DNAJC22Q8N4W6 341 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 OR4K2Q8NGD2 314 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 OR5AR1Q8NGP9 310 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.33□□□□□ -0.6
SOD1-202ENST00000389995 COG1Q8WTW3 980 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 C8orf44Q96CB5 159 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 DCUN1D1Q96GG9 259 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 TRIM56Q9BRZ2 755 aaKnown RBP11.33□□□□□ -0.6
SOD1-202ENST00000389995 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.33□□□□□ -0.63e-7■■□□□ 13.6
SOD1-202ENST00000389995 PTGFRNQ9P2B2 879 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 NEU2Q9Y3R4 380 aa11.33□□□□□ -0.6
SOD1-202ENST00000389995 FLNAP21333 2647 aaKnown RBP11.33□□□□□ -0.6
SOD1-202ENST00000389995 VPS13CQ709C8 3753 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 HEATR5BQ9P2D3 2071 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 GOLGA6L19H0YKK7 550 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 IFRD1O00458 451 aaPredicted RBP11.32□□□□□ -0.6
SOD1-202ENST00000389995 PPP1R12AO14974 1030 aaPredicted RBP11.32□□□□□ -0.6
SOD1-202ENST00000389995 AGTP01019 485 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 CHRM5P08912 532 aaPredicted RBP11.32□□□□□ -0.6
SOD1-202ENST00000389995 PEBP1P30086 187 aaKnown RBP11.32□□□□□ -0.6
SOD1-202ENST00000389995 SSTR2P30874 369 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 OR1D4P47884 311 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 PRLHRP49683 370 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 CDKN1CP49918 316 aaPredicted RBP11.32□□□□□ -0.6
SOD1-202ENST00000389995 TNFSF10P50591 281 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 PMP22Q01453 160 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 WASHC5Q12768 1159 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 BOP1Q14137 746 aaKnown RBP11.32□□□□□ -0.6
SOD1-202ENST00000389995 IQCB1Q15051 598 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 ZNF658BQ4V348 819 aaPredicted RBP11.32□□□□□ -0.6
SOD1-202ENST00000389995 TLDC1Q6P9B6 456 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 RFX6Q8HWS3 928 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 SIRT6Q8N6T7 355 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 TFGQ92734 400 aaPredicted RBP11.32□□□□□ -0.6
SOD1-202ENST00000389995 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.32□□□□□ -0.63e-13■■■□□ 15.7
SOD1-202ENST00000389995 NAP1L5Q96NT1 182 aaPredicted RBP11.32□□□□□ -0.6
SOD1-202ENST00000389995 LMF1Q96S06 567 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 EURLQ9NYK6 297 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 HACD3Q9P035 362 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 CTTNBP2NLQ9P2B4 639 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 SEC14L3Q9UDX4 400 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 CRLS1Q9UJA2 301 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 TINAGQ9UJW2 476 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 PLCL2Q9UPR0 1127 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 TDRKHQ9Y2W6 561 aaKnown RBP11.32□□□□□ -0.6
SOD1-202ENST00000389995 MAU2Q9Y6X3 613 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 ABCA2Q9BZC7 2435 aa11.32□□□□□ -0.6
SOD1-202ENST00000389995 A0A0J9YY10 115 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 ISM1B1AKI9 464 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 ZNHIT1O43257 154 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 CELA2AP08217 269 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 PRSS56P0CW18 603 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 ATP1B2P14415 290 aaPredicted RBP11.31□□□□□ -0.6
SOD1-202ENST00000389995 HOXB4P17483 251 aaPredicted RBP11.31□□□□□ -0.6
SOD1-202ENST00000389995 GRIA3P42263 894 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 GCGRP47871 477 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 XIAPP98170 497 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 TLE4Q04727 773 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 BRD3Q15059 726 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 C3AR1Q16581 482 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 RPTNQ6XPR3 784 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 NAPRTQ6XQN6 538 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 ARHGEF18Q6ZSZ5 1173 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 LUZP1Q86V48 1076 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 CEP97Q8IW35 865 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 MMP21Q8N119 569 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 C2orf73Q8N5S3 287 aaPredicted RBP11.31□□□□□ -0.6
SOD1-202ENST00000389995 OR13C4Q8NGS5 318 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 BRIX1Q8TDN6 353 aaKnown RBP11.31□□□□□ -0.6
SOD1-202ENST00000389995 PSMF1Q92530 271 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 APOL2Q9BQE5 337 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 MAK16Q9BXY0 300 aaKnown RBP11.31□□□□□ -0.6
SOD1-202ENST00000389995 PACSIN1Q9BY11 444 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 MVB12BQ9H7P6 319 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 CIDEBQ9UHD4 219 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 ABCA4P78363 2273 aa11.31□□□□□ -0.6
SOD1-202ENST00000389995 HRNRQ86YZ3 2850 aaPredicted RBP11.3□□□□□ -0.6
SOD1-202ENST00000389995 SCN3AQ9NY46 2000 aa11.3□□□□□ -0.6
SOD1-202ENST00000389995 A0A1B0GTH6 734 aa11.3□□□□□ -0.6
SOD1-202ENST00000389995 A0A1B0GX78 115 aa11.3□□□□□ -0.6
SOD1-202ENST00000389995 DYTNA2CJ06 578 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms