RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 MRGPREQ86SM8 312 aa16.26■□□□□ 0.19
SMN2-201ENST00000380741 RBMXL3Q8N7X1 1067 aaKnown RBP16.26■□□□□ 0.19
SMN2-201ENST00000380741 SGSM3Q96HU1 749 aa16.26■□□□□ 0.19
SMN2-201ENST00000380741 HES6Q96HZ4 224 aa16.26■□□□□ 0.19
SMN2-201ENST00000380741 C17orf62Q9BQA9 187 aa16.26■□□□□ 0.19
SMN2-201ENST00000380741 ETNK1Q9HBU6 452 aa16.26■□□□□ 0.19
SMN2-201ENST00000380741 DHCR7Q9UBM7 475 aaKnown RBP16.26■□□□□ 0.19
SMN2-201ENST00000380741 CAPN6Q9Y6Q1 641 aa16.26■□□□□ 0.19
SMN2-201ENST00000380741 HIVEP3Q5T1R4 2406 aa16.26■□□□□ 0.19
SMN2-201ENST00000380741 ISM1B1AKI9 464 aa16.25■□□□□ 0.19
SMN2-201ENST00000380741 SUN1O94901 812 aa16.25■□□□□ 0.19
SMN2-201ENST00000380741 AGFG2O95081 481 aa16.25■□□□□ 0.19
SMN2-201ENST00000380741 GOT2P00505 430 aaKnown RBP16.25■□□□□ 0.19
SMN2-201ENST00000380741 GRIA1P42261 906 aa16.25■□□□□ 0.19
SMN2-201ENST00000380741 OASLQ15646 514 aaKnown RBP16.25■□□□□ 0.19
SMN2-201ENST00000380741 INPP5JQ15735 1006 aaPredicted RBP16.25■□□□□ 0.19
SMN2-201ENST00000380741 SLC5A12Q1EHB4 618 aa16.25■□□□□ 0.19
SMN2-201ENST00000380741 TSTD2Q5T7W7 516 aa16.25■□□□□ 0.19
SMN2-201ENST00000380741 FHL5Q5TD97 284 aa16.25■□□□□ 0.19
SMN2-201ENST00000380741 LYPLAL1Q5VWZ2 237 aa16.25■□□□□ 0.19
SMN2-201ENST00000380741 SLC6A19Q695T7 634 aa16.25■□□□□ 0.19
SMN2-201ENST00000380741 AFTPHQ6ULP2 937 aa16.25■□□□□ 0.19
SMN2-201ENST00000380741 HPS6Q86YV9 775 aa16.25■□□□□ 0.19
SMN2-201ENST00000380741 FAM20CQ8IXL6 584 aa16.25■□□□□ 0.19
SMN2-201ENST00000380741 ZNF655Q8N720 491 aaPredicted RBP16.25■□□□□ 0.19
SMN2-201ENST00000380741 PROKR1Q8TCW9 393 aa16.25■□□□□ 0.19
SMN2-201ENST00000380741 PNPLA2Q96AD5 504 aa16.25■□□□□ 0.19
SMN2-201ENST00000380741 ZNF778Q96MU6 729 aa16.25■□□□□ 0.19
SMN2-201ENST00000380741 SMAD5Q99717 465 aaKnown RBP16.25■□□□□ 0.19
SMN2-201ENST00000380741 LRRC4CQ9HCJ2 640 aa16.25■□□□□ 0.19
SMN2-201ENST00000380741 SLAMF7Q9NQ25 335 aa16.25■□□□□ 0.19
SMN2-201ENST00000380741 GPN3Q9UHW5 284 aaPredicted RBP16.25■□□□□ 0.19
SMN2-201ENST00000380741 CDYLQ9Y232 598 aa16.25■□□□□ 0.19
SMN2-201ENST00000380741 PTRH2Q9Y3E5 179 aaKnown RBP16.25■□□□□ 0.19
SMN2-201ENST00000380741 NUP210LQ5VU65 1888 aa16.25■□□□□ 0.19
SMN2-201ENST00000380741 PCM1Q15154 2024 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 LIASO43766 372 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 CNOT3O75175 753 aaKnown RBP16.24■□□□□ 0.19
SMN2-201ENST00000380741 GAS8O95995 478 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 IFNB1P01574 187 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 PKLRP30613 574 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 STIP1P31948 543 aaKnown RBP16.24■□□□□ 0.19
SMN2-201ENST00000380741 CCR7P32248 378 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 FOXL2P58012 376 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 DCDP81605 110 aaKnown RBP16.24■□□□□ 0.19
SMN2-201ENST00000380741 ACVR1Q04771 509 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 SEMA3AQ14563 771 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 SSPNQ14714 243 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 SLC9A5Q14940 896 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 KIR2DS3Q14952 304 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 KYNUQ16719 465 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 TLDC1Q6P9B6 456 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 PPP1R21Q6ZMI0 780 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 ZNF534Q76KX8 674 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 VRK3Q8IV63 474 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 SLC22A15Q8IZD6 547 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 DNAJC22Q8N4W6 341 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 OR4L1Q8NH43 312 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 LKAAEAR1Q8TD35 194 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 IP6K3Q96PC2 410 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 RANBP9Q96S59 729 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 TTC1Q99614 292 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 TXLNGQ9NUQ3 528 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 IRAK4Q9NWZ3 460 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 IFT80Q9P2H3 777 aaPredicted RBP16.24■□□□□ 0.19
SMN2-201ENST00000380741 RIMKLBQ9ULI2 386 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 SRPK3Q9UPE1 567 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 TEX15Q9BXT5 2789 aa16.24■□□□□ 0.19
SMN2-201ENST00000380741 E7EVH7 732 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 KDM1AO60341 852 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 MAGP20916 626 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 ADRA1DP25100 572 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 FDFT1P37268 417 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 FOLR3P41439 243 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 RAB28P51157 221 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 HSPA14Q0VDF9 509 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 NKAIN1Q4KMZ8 207 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 DNAJC21Q5F1R6 531 aaKnown RBP16.23■□□□□ 0.19
SMN2-201ENST00000380741 DCAF10Q5QP82 559 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 VWA5B1Q5TIE3 1220 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 PRUNE1Q86TP1 453 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 TMEM151BQ8IW70 566 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 TXLNBQ8N3L3 684 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 LINC01555Q8NAE3 123 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 OR2Y1Q8NGV0 311 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 OR6P1Q8NGX9 317 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 MENTQ9BUN1 341 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 AP1M1Q9BXS5 423 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 CASS4Q9NQ75 786 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 NDOR1Q9UHB4 597 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 CIDEBQ9UHD4 219 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 PLCL2Q9UPR0 1127 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 KLHL20Q9Y2M5 609 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 TCAF1Q9Y4C2 921 aa16.23■□□□□ 0.19
SMN2-201ENST00000380741 IQCF5A8MTL0 148 aa16.22■□□□□ 0.19
SMN2-201ENST00000380741 TCP11X1B4DZS4 312 aa16.22■□□□□ 0.19
SMN2-201ENST00000380741 F8W8V4 182 aa16.22■□□□□ 0.19
SMN2-201ENST00000380741 SEMA7AO75326 666 aa16.22■□□□□ 0.19
SMN2-201ENST00000380741 GPC4O75487 556 aa16.22■□□□□ 0.19
SMN2-201ENST00000380741 ETS1P14921 441 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms