RNA–Protein interactions for RNA: ENST00000378300.9

TPM2-204, Transcript of tropomyosin 2, humanhuman

TSL 3 BASIC

Gene TPM2, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-204ENST00000378300 ASF1AQ9Y294 204 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 FANCMQ8IYD8 2048 aa13.72□□□□□ -0.21
TPM2-204ENST00000378300 TNRC6BQ9UPQ9 1833 aaKnown RBP13.72□□□□□ -0.21
TPM2-204ENST00000378300 KCNJ13O60928 360 aa13.71□□□□□ -0.21
TPM2-204ENST00000378300 CATP04040 527 aaKnown RBP13.71□□□□□ -0.21
TPM2-204ENST00000378300 S100BP04271 92 aaPredicted RBP13.71□□□□□ -0.21
TPM2-204ENST00000378300 HIST1H2AGP0C0S8 130 aaPredicted RBP13.71□□□□□ -0.21
TPM2-204ENST00000378300 JUNDP17535 347 aa13.71□□□□□ -0.21
TPM2-204ENST00000378300 HIST1H2ADP20671 130 aa13.71□□□□□ -0.21
TPM2-204ENST00000378300 GRK2P25098 689 aa13.71□□□□□ -0.21
TPM2-204ENST00000378300 HSPA7P48741 367 aa13.71□□□□□ -0.21
TPM2-204ENST00000378300 NXPH1P58417 271 aa13.71□□□□□ -0.21
TPM2-204ENST00000378300 PRKG2Q13237 762 aa13.71□□□□□ -0.21
TPM2-204ENST00000378300 LRP8Q14114 963 aa13.71□□□□□ -0.21
TPM2-204ENST00000378300 CMPK2Q5EBM0 449 aa13.71□□□□□ -0.21
TPM2-204ENST00000378300 ARL13AQ5H913 290 aaPredicted RBP13.71□□□□□ -0.21
TPM2-204ENST00000378300 CFAP157Q5JU67 520 aa13.71□□□□□ -0.21
TPM2-204ENST00000378300 SFTPA2Q8IWL1 248 aa13.71□□□□□ -0.21
TPM2-204ENST00000378300 SREK1Q8WXA9 508 aaKnown RBP13.71□□□□□ -0.21
TPM2-204ENST00000378300 HIST1H2AHQ96KK5 128 aa13.71□□□□□ -0.21
TPM2-204ENST00000378300 C12orf66Q96MD2 445 aa13.71□□□□□ -0.21
TPM2-204ENST00000378300 PKP4Q99569 1192 aa13.71□□□□□ -0.21
TPM2-204ENST00000378300 HIST1H2AJQ99878 128 aa13.71□□□□□ -0.21
TPM2-204ENST00000378300 H2AFJQ9BTM1 129 aa13.71□□□□□ -0.21
TPM2-204ENST00000378300 IMP3Q9NV31 184 aaKnown RBP13.71□□□□□ -0.21
TPM2-204ENST00000378300 THAP1Q9NVV9 213 aa13.71□□□□□ -0.21
TPM2-204ENST00000378300 PLAGL1Q9UM63 463 aa13.71□□□□□ -0.21
TPM2-204ENST00000378300 DMDP11532 3685 aa13.71□□□□□ -0.21
TPM2-204ENST00000378300 KMT2EQ8IZD2 1858 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 TRBV23OR9-2A0A075B6M9 112 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 A0A1B0GTL3 188 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 STX16-NPEPL1H3BU86 382 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 IFRD1O00458 451 aaPredicted RBP13.71□□□□□ -0.22
TPM2-204ENST00000378300 E2F3O00716 465 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 UBFD1O14562 309 aaKnown RBP13.71□□□□□ -0.22
TPM2-204ENST00000378300 STX16O14662 325 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 VILLO15195 856 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 ANXA5P08758 320 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 MAP4P27816 1152 aaKnown RBP13.71□□□□□ -0.22
TPM2-204ENST00000378300 RASSF2P50749 326 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 AFF3P51826 1226 aaKnown RBP13.71□□□□□ -0.22
TPM2-204ENST00000378300 RCN2Q14257 317 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 GRB7Q14451 532 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 UAP1L1Q3KQV9 507 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 PRRT3Q5FWE3 981 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 SULT1C3Q6IMI6 304 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 UNC5DQ6UXZ4 953 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 FRMD7Q6ZUT3 714 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 RAB44Q7Z6P3 723 aaPredicted RBP13.71□□□□□ -0.22
TPM2-204ENST00000378300 DCP2Q8IU60 420 aaKnown RBP13.71□□□□□ -0.22
TPM2-204ENST00000378300 AGR3Q8TD06 166 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 GPBAR1Q8TDU6 330 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 PYCR2Q96C36 320 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 LRRC61Q9BV99 259 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 TRIM54Q9BYV2 358 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 DRC3Q9H069 523 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 ATG10Q9H0Y0 220 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 TNFRSF12AQ9NP84 129 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 WWOXQ9NZC7 414 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 MARCOQ9UEW3 520 aaPredicted RBP13.71□□□□□ -0.22
TPM2-204ENST00000378300 APOBEC3BQ9UH17 382 aaKnown RBP13.71□□□□□ -0.22
TPM2-204ENST00000378300 PCTPQ9UKL6 214 aa13.71□□□□□ -0.22
TPM2-204ENST00000378300 A0A1B0GVT2 93 aa13.7□□□□□ -0.22
TPM2-204ENST00000378300 A6NCN8 305 aa13.7□□□□□ -0.22
TPM2-204ENST00000378300 TMEM114B3SHH9 223 aa13.7□□□□□ -0.22
TPM2-204ENST00000378300 H2AFYO75367 372 aaKnown RBP13.7□□□□□ -0.22
TPM2-204ENST00000378300 SLC16A8O95907 504 aa13.7□□□□□ -0.22
TPM2-204ENST00000378300 CSF2P04141 144 aa13.7□□□□□ -0.22
TPM2-204ENST00000378300 RPS17P08708 135 aaKnown RBP13.7□□□□□ -0.22
TPM2-204ENST00000378300 NME1P15531 152 aaKnown RBP13.7□□□□□ -0.22
TPM2-204ENST00000378300 AP1S2P56377 157 aa13.7□□□□□ -0.22
TPM2-204ENST00000378300 CDKL1Q00532 357 aa13.7□□□□□ -0.22
TPM2-204ENST00000378300 ASPHQ12797 758 aa13.7□□□□□ -0.22
TPM2-204ENST00000378300 ILF3Q12906 894 aaKnown RBP eCLIP13.7□□□□□ -0.22
TPM2-204ENST00000378300 NAA25Q14CX7 972 aa13.7□□□□□ -0.22
TPM2-204ENST00000378300 CEP68Q76N32 757 aa13.7□□□□□ -0.22
TPM2-204ENST00000378300 KIF2BQ8N4N8 673 aa13.7□□□□□ -0.22
TPM2-204ENST00000378300 ZBTB44Q8NCP5 570 aa13.7□□□□□ -0.22
TPM2-204ENST00000378300 PPFIBP2Q8ND30 876 aa13.7□□□□□ -0.22
TPM2-204ENST00000378300 C7orf26Q96N11 449 aa13.7□□□□□ -0.22
TPM2-204ENST00000378300 LRRC37BQ96QE4 947 aa13.7□□□□□ -0.22
TPM2-204ENST00000378300 C1QTNF3Q9BXJ4 246 aa13.7□□□□□ -0.22
TPM2-204ENST00000378300 ZBTB26Q9HCK0 441 aa13.7□□□□□ -0.22
TPM2-204ENST00000378300 SEMA4BQ9NPR2 832 aaPredicted RBP13.7□□□□□ -0.22
TPM2-204ENST00000378300 ZSCAN32Q9NX65 697 aa13.7□□□□□ -0.22
TPM2-204ENST00000378300 TDRKHQ9Y2W6 561 aaKnown RBP13.7□□□□□ -0.22
TPM2-204ENST00000378300 L3MBTL1Q9Y468 752 aa13.7□□□□□ -0.22
TPM2-204ENST00000378300 ARHGEF17Q96PE2 2063 aaPredicted RBP13.7□□□□□ -0.22
TPM2-204ENST00000378300 TP53BP1Q12888 1972 aaPredicted RBP13.69□□□□□ -0.22
TPM2-204ENST00000378300 NPHS1O60500 1241 aa13.69□□□□□ -0.22
TPM2-204ENST00000378300 CCNT2O60583 730 aaKnown RBP13.69□□□□□ -0.22
TPM2-204ENST00000378300 HSPA4LO95757 839 aa13.69□□□□□ -0.22
TPM2-204ENST00000378300 KITP10721 976 aa13.69□□□□□ -0.22
TPM2-204ENST00000378300 CTSEP14091 401 aa13.69□□□□□ -0.22
TPM2-204ENST00000378300 MPSTP25325 297 aa13.69□□□□□ -0.22
TPM2-204ENST00000378300 IMPA1P29218 277 aa13.69□□□□□ -0.22
TPM2-204ENST00000378300 BNC1Q01954 994 aa13.69□□□□□ -0.22
TPM2-204ENST00000378300 PCBP2Q15366 365 aaKnown RBP eCLIP13.69□□□□□ -0.22
TPM2-204ENST00000378300 RPE65Q16518 533 aa13.69□□□□□ -0.22
TPM2-204ENST00000378300 ZNF528Q3MIS6 628 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms