RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 KLF8O95600 359 aaPredicted RBP13.36□□□□□ -0.27
GPC6-201ENST00000377047 POU2F1P14859 743 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 EIF2B2P49770 351 aaKnown RBP13.36□□□□□ -0.27
GPC6-201ENST00000377047 SEPHS1P49903 392 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 IDH3AP50213 366 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 HADHBP55084 474 aaKnown RBP13.36□□□□□ -0.27
GPC6-201ENST00000377047 ARHGAP40Q5TG30 622 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 LPCAT4Q643R3 524 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 DRICH1Q6PGQ1 229 aaPredicted RBP13.36□□□□□ -0.27
GPC6-201ENST00000377047 SLC29A4Q7RTT9 530 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 TMEM139Q8IV31 216 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 CAMKVQ8NCB2 501 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 SAMD11Q96NU1 681 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 SMOQ99835 787 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 TTYH3Q9C0H2 523 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 RNF121Q9H920 327 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 ITM2CQ9NQX7 267 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 DGKBQ9Y6T7 804 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 PRODHO43272 600 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 F7P08709 466 aaPredicted RBP13.36□□□□□ -0.27
GPC6-201ENST00000377047 ZNF823P16415 610 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 SMU1Q2TAY7 513 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 PQLC1Q8N2U9 271 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 PSMA8Q8TAA3 256 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 CLCC1Q96S66 551 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 CIB1Q99828 191 aa13.36□□□□□ -0.27
GPC6-201ENST00000377047 GNEQ9Y223 722 aaKnown RBP13.36□□□□□ -0.27
GPC6-201ENST00000377047 A0A1W2PRB8 838 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 REM1O75628 298 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 GALTP07902 379 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 SLC10A3P09131 477 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 MYCLP1P12525 358 aaPredicted RBP13.35□□□□□ -0.27
GPC6-201ENST00000377047 SLC39A4Q6P5W5 647 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 SLC9B2Q86UD5 537 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 ZNF280BQ86YH2 543 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 CNTD1Q8N815 330 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 OR4C6Q8NH72 309 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 EFHD2Q96C19 240 aaPredicted RBP13.35□□□□□ -0.27
GPC6-201ENST00000377047 DSN1Q9H410 356 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 SLC7A1P30825 629 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 HCAR3P49019 387 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 KCTD21Q4G0X4 260 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 YTHDF3Q7Z739 585 aaKnown RBP13.35□□□□□ -0.27
GPC6-201ENST00000377047 PGAM4Q8N0Y7 254 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 OR2AJ1Q8NGZ0 328 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 SLC35F5Q8WV83 523 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 ARMC5Q96C12 935 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 NARS2Q96I59 477 aaKnown RBP13.35□□□□□ -0.27
GPC6-201ENST00000377047 SLC2A4RGQ9NR83 387 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 ZNF222Q9UK12 451 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 PPM1HQ9ULR3 514 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 PLAGL1Q9UM63 463 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 XRN1Q8IZH2 1706 aaKnown RBP13.35□□□□□ -0.27
GPC6-201ENST00000377047 TCRBV21S2A2A0A5A6 115 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 ZNF30P17039 623 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 PRKD1Q15139 912 aaPredicted RBP13.35□□□□□ -0.27
GPC6-201ENST00000377047 TOR1AIP1Q5JTV8 583 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 UBAP2Q5T6F2 1119 aaKnown RBP13.35□□□□□ -0.27
GPC6-201ENST00000377047 ARL10Q8N8L6 244 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 SLC25A36Q96CQ1 311 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 ARHGAP39Q9C0H5 1083 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 PSIP1O75475 530 aaKnown RBP13.35□□□□□ -0.27
GPC6-201ENST00000377047 RSL1D1O76021 490 aaKnown RBP13.35□□□□□ -0.27
GPC6-201ENST00000377047 C9P02748 559 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 KLK3P07288 261 aaPredicted RBP13.35□□□□□ -0.27
GPC6-201ENST00000377047 TCF4P15884 667 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 CLNKQ7Z7G1 428 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 COX4I2Q96KJ9 171 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 CTPS2Q9NRF8 586 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 CYP8B1Q9UNU6 501 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 CDC7O00311 574 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 TPD52L2O43399 206 aaKnown RBP13.35□□□□□ -0.27
GPC6-201ENST00000377047 SCELO95171 688 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 RHOP08100 348 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 PIM1P11309 404 aaPredicted RBP13.35□□□□□ -0.27
GPC6-201ENST00000377047 PITRM1Q5JRX3 1037 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 FAM182AQ5T1J6 154 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 ZNF598Q86UK7 904 aaKnown RBP13.35□□□□□ -0.27
GPC6-201ENST00000377047 FAM47BQ8NA70 645 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 RBM15BQ8NDT2 890 aaKnown RBP13.35□□□□□ -0.27
GPC6-201ENST00000377047 FAM192AQ9GZU8 254 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 FADS3Q9Y5Q0 445 aa13.35□□□□□ -0.27
GPC6-201ENST00000377047 PMM2O15305 246 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 QPRTQ15274 297 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 AAK1Q2M2I8 961 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 SLC22A15Q8IZD6 547 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 IFT80Q9P2H3 777 aaPredicted RBP13.34□□□□□ -0.27
GPC6-201ENST00000377047 ANKRD66B4E2M5 251 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 CXCR6O00574 342 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 PEX12O00623 359 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 AXIN1O15169 862 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 ADAMDEC1O15204 470 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 KMOO15229 486 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 ECI2O75521 394 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 NR1H2P55055 460 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 HERVK_113P63132 956 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 ZNF846Q147U1 533 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 IFI44LQ53G44 452 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 C12orf76Q8N812 135 aaPredicted RBP13.34□□□□□ -0.27
GPC6-201ENST00000377047 SLC13A3Q8WWT9 602 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms