RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 CDKN2AIPNLQ96HQ2 116 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 PSKH2Q96QS6 385 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 PACSIN3Q9UKS6 424 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 PLOD3O60568 738 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 AP2A2O94973 939 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 UXS1Q8NBZ7 420 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 MED28Q9H204 178 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 U3KQV3 271 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 OR4F21O95013 312 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 C9P02748 559 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 GAD2Q05329 585 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 FRMD7Q6ZUT3 714 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 CYP2U1Q7Z449 544 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 OR8J3Q8NGG0 315 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 FAR1Q8WVX9 515 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 FARSBQ9NSD9 589 aaKnown RBP11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 TLL1O43897 1013 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 RNASE11Q8TAA1 199 aaKnown RBP11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 TIMM22Q9Y584 194 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 RGS20O76081 388 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 PENKP01210 267 aaPredicted RBP11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 GK3PQ14409 553 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 XAGE5Q8WWM1 108 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 RGMAQ96B86 450 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 DPEP3Q9H4B8 488 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 NMUR1Q9HB89 426 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 EFCAB9A8MZ26 197 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 ANKRD66B4E2M5 251 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 STARP49675 285 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 LSM3P62310 102 aaKnown RBP11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 TXNL4AP83876 142 aaKnown RBP11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 NFKB2Q00653 900 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 HACD2Q6Y1H2 254 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 ATG14Q6ZNE5 492 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 WRAP73Q9P2S5 460 aaPredicted RBP11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 WASF2Q9Y6W5 498 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 WNT9AO14904 365 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 HSD3B1P14060 373 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 HSD3B2P26439 372 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 RFC2P35250 354 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 HSF2Q03933 536 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 SLC39A4Q6P5W5 647 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 FKBPLQ9UIM3 349 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 CNOT6Q9ULM6 557 aaKnown RBP11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 GMEB1Q9Y692 573 aa11.8□□□□□ -0.52
CDC42BPA-203ENST00000366766 KIF13BQ9NQT8 1826 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 HPRP00739 348 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 LMO3Q8TAP4 145 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 ADAMTS10Q9H324 1103 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 S100A9P06702 114 aaKnown RBP11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 ILF3Q12906 894 aaKnown RBP eCLIP11.79□□□□□ -0.523e-7■■■■■ 31.9
CDC42BPA-203ENST00000366766 MOGSQ13724 837 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 RBM20Q5T481 1227 aaKnown RBP11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 SDHAF4Q5VUM1 108 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 PAOXQ6QHF9 649 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 GPALPP1Q8IXQ4 340 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 PHF12Q96QT6 1004 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 POLR2J3Q9H1A7 115 aaKnown RBP11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 RABL2AQ9UBK7 228 aaPredicted RBP11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 CNOT11Q9UKZ1 510 aaKnown RBP11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 RABL2BQ9UNT1 228 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 A0A0U1RQF3 1178 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 ECI2O75521 394 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 PTPN2P17706 415 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 USP30Q70CQ3 517 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 C11orf24Q96F05 449 aaPredicted RBP11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 RANBP9Q96S59 729 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 AKTIPQ9H8T0 292 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 TAF1P21675 1872 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 CLCN4P51793 760 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 FER1L6Q2WGJ9 1857 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 RBM18Q96H35 190 aaKnown RBP11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 MAPKAP1Q9BPZ7 522 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 PDCD10Q9BUL8 212 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 RASSF1Q9NS23 344 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 EIF3FO00303 357 aaPredicted RBP11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 SLC6A4P31645 630 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 MSX2P35548 267 aaPredicted RBP11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 DEFB115Q30KQ5 88 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 CFAP206Q8IYR0 622 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 OR7D4Q8NG98 312 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 DNASE1L2Q92874 299 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 P2RX2Q9UBL9 471 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 SCAMP3O14828 347 aaKnown RBP11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 GRIA2P42262 883 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 GALNT1Q10472 559 aaPredicted RBP11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 PCLAFQ15004 111 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 METTL2BQ6P1Q9 378 aaKnown RBP11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 ZDHHC14Q8IZN3 488 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 CLHC1Q8NHS4 586 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 MAP4K5Q9Y4K4 846 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 SLC25A24Q6NUK1 477 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 ZCCHC12Q6PEW1 402 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 SIGLEC10Q96LC7 697 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 FBXL21Q9UKT6 434 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 ZNF451Q9Y4E5 1061 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 ECM29Q5VYK3 1845 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 MOAP1Q96BY2 351 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 SPAG17Q6Q759 2223 aa11.79□□□□□ -0.52
CDC42BPA-203ENST00000366766 DLX3O60479 287 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms