RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 AP1S2P56377 157 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 CDKL1Q00532 357 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 HHEXQ03014 270 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 PRKG2Q13237 762 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 KRT33BQ14525 404 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 PROX2Q3B8N5 592 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 INAVAQ3KP66 663 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 CCSMST1Q4G0I0 132 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 N4BP2L1Q5TBK1 243 aaPredicted RBP12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 GPSM1Q86YR5 675 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 TRIM48Q8IWZ4 208 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 KYQ8NBH2 561 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 OR9A1PQ8NGU1 263 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 SCYL1Q96KG9 808 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 PKP4Q99569 1192 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 MENTQ9BUN1 341 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 TRIM54Q9BYV2 358 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 MRPL46Q9H2W6 279 aaKnown RBP12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 UCK1Q9HA47 277 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 PADI4Q9UM07 663 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 U3KQA8 63 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 ANKRD12Q6UB98 2062 aa12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 NUDT21O43809 227 aaKnown RBP12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 PLIN3O60664 434 aa12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 HIST1H2AGP0C0S8 130 aaPredicted RBP12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 MTHFD2P13995 350 aa12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 GLB1P16278 677 aa12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 HIST1H2ADP20671 130 aa12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 SLC18A1P54219 525 aa12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 TGFBIQ15582 683 aa12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 CCDC153Q494R4 210 aa12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 CDKL4Q5MAI5 379 aa12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 TMEM26Q6ZUK4 368 aa12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 ZNF438Q7Z4V0 828 aa12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 TCP10LQ8TDR4 215 aa12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 SH3KBP1Q96B97 665 aa12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 HIST1H2AHQ96KK5 128 aa12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 CCDC138Q96M89 665 aa12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 HIST1H2AJQ99878 128 aa12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 H2AFJQ9BTM1 129 aa12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 HGH1Q9BTY7 390 aa12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 NCKIPSDQ9NZQ3 722 aa12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 XPR1Q9UBH6 696 aa12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 RNF112Q9ULX5 631 aa12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 TDRKHQ9Y2W6 561 aaKnown RBP12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 CNOT1A5YKK6 2376 aaKnown RBP12.05□□□□□ -0.48
NIF3L1-201ENST00000359683 EME2A4GXA9 379 aaPredicted RBP12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 SYCE1LA8MT33 242 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 KLK8O60259 260 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 PROCP04070 461 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 MYF5P13349 255 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 RPA3P35244 121 aaPredicted RBP12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 LIMK1P53667 647 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 MPP2Q14168 576 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 GPR18Q14330 331 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 NR0B2Q15466 257 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 STPG1Q5TH74 334 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 OR6C4Q8NGE1 309 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 OR52E1Q8NGJ3 308 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 RHBDD1Q8TEB9 315 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 C12orf65Q9H3J6 166 aaKnown RBP12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 STN1Q9H668 368 aaKnown RBP12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 MED4Q9NPJ6 270 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 ARL15Q9NXU5 204 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 UTP6Q9NYH9 597 aaKnown RBP12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 LRIT1Q9P2V4 623 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 RNF215Q9Y6U7 377 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 ACACBO00763 2458 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 KRT87PA6NCN2 255 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 UBXN8O00124 270 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 TK2O00142 265 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 SH3BP5O60239 455 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 KDM1AO60341 852 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 CBFA2T3O75081 653 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 ANXA5P08758 320 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 ERGP11308 486 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 CKMT1AP12532 417 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 PNLIPP16233 465 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 HSD17B2P37059 387 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 NR1D2Q14995 579 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 ARHGAP19Q14CB8 494 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 CYP2A13Q16696 494 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 FRA10AC1Q70Z53 315 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 PDPRQ8NCN5 879 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 HMGCLL1Q8TB92 370 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 DENND1AQ8TEH3 1009 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 SETD7Q8WTS6 366 aaKnown RBP12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 FBXL8Q96CD0 374 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 TWSG1Q9GZX9 223 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 IQCGQ9H095 443 aaKnown RBP12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 KCNK9Q9NPC2 374 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 NUDT4Q9NZJ9 180 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 SPATA7Q9P0W8 599 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 CPSF2Q9P2I0 782 aaKnown RBP12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 SLC17A7Q9P2U7 560 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 PLAGL1Q9UM63 463 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 ICKQ9UPZ9 632 aa12.04□□□□□ -0.48
NIF3L1-201ENST00000359683 LILRA5A6NI73 299 aa12.03□□□□□ -0.48
NIF3L1-201ENST00000359683 RHPN2P1A8MT19 583 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms