RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 KIR2DS3Q14952 304 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 KYNUQ16719 465 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 NADK2Q4G0N4 442 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 DNAJC21Q5F1R6 531 aaKnown RBP10.29□□□□□ -0.76
CAPN3-204ENST00000356316 ZNF789Q5FWF6 425 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 AARS2Q5JTZ9 985 aaKnown RBP10.29□□□□□ -0.76
CAPN3-204ENST00000356316 TSTD2Q5T7W7 516 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 FHL5Q5TD97 284 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 C1orf189Q5VU69 101 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 PAPD7Q5XG87 772 aaKnown RBP10.29□□□□□ -0.76
CAPN3-204ENST00000356316 TLDC1Q6P9B6 456 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 NAPRTQ6XQN6 538 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 CLEC1AQ8NC01 280 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 GALNT11Q8NCW6 608 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 PPHLN1Q8NEY8 458 aaKnown RBP10.29□□□□□ -0.76
CAPN3-204ENST00000356316 FDCSPQ8NFU4 85 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 CFAP61Q8NHU2 1237 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 PROKR1Q8TCW9 393 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 DENND1AQ8TEH3 1009 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 ATG4AQ8WYN0 398 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 OR2A14Q96R47 310 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 RANBP9Q96S59 729 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 DESI2Q9BSY9 194 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 AP1M1Q9BXS5 423 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 TSGA10Q9BZW7 698 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 CHRNA10Q9GZZ6 450 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 SPRTNQ9H040 489 aaPredicted RBP10.29□□□□□ -0.76
CAPN3-204ENST00000356316 FAM60AQ9NP50 221 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 RAB6BQ9NRW1 208 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 INTS7Q9NVH2 962 aaKnown RBP10.29□□□□□ -0.76
CAPN3-204ENST00000356316 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.29□□□□□ -0.76
CAPN3-204ENST00000356316 SRPK3Q9UPE1 567 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 PLCL2Q9UPR0 1127 aa10.29□□□□□ -0.76
CAPN3-204ENST00000356316 PTRH2Q9Y3E5 179 aaKnown RBP10.29□□□□□ -0.76
CAPN3-204ENST00000356316 UTP20O75691 2785 aaKnown RBP10.28□□□□□ -0.76
CAPN3-204ENST00000356316 BHMG1C9JSJ3 638 aaPredicted RBP10.28□□□□□ -0.76
CAPN3-204ENST00000356316 AP3B1O00203 1094 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 ZSCAN9O15535 394 aaPredicted RBP10.28□□□□□ -0.76
CAPN3-204ENST00000356316 LIASO43766 372 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 OR1I1O60431 355 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 CEACAM4O75871 244 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 SUN1O94901 812 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 AGFG2O95081 481 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 ALPPP05187 535 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 CAPN1P07384 714 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 APRTP07741 180 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 PIM1P11309 404 aaPredicted RBP10.28□□□□□ -0.76
CAPN3-204ENST00000356316 ALAS2P22557 587 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 FOXN2P32314 431 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 TTPAP49638 278 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 RAB28P51157 221 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 SNX1Q13596 522 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 SLC5A12Q1EHB4 618 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 FAM69BQ5VUD6 431 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 RHBDD2Q6NTF9 364 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 JMJD6Q6NYC1 403 aaPredicted RBP10.28□□□□□ -0.76
CAPN3-204ENST00000356316 FAM198BQ6UWH4 519 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 TRIM73Q86UV7 250 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 SLC22A15Q8IZD6 547 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 RAB42Q8N4Z0 105 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 ZBTB2Q8N680 514 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 ZNF655Q8N720 491 aaPredicted RBP10.28□□□□□ -0.76
CAPN3-204ENST00000356316 GLIS1Q8NBF1 620 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 SPC24Q8NBT2 197 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 OR13J1Q8NGT2 312 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 PEX13Q92968 403 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 PTERQ96BW5 349 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 CARD6Q9BX69 1037 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 SLC29A3Q9BZD2 475 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 SPHK1Q9NYA1 384 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 PAK5Q9P286 719 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 SLC39A10Q9ULF5 831 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 RIMKLBQ9ULI2 386 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 PLAGL1Q9UM63 463 aa10.28□□□□□ -0.76
CAPN3-204ENST00000356316 KPNA5O15131 536 aa10.27□□□□□ -0.77
CAPN3-204ENST00000356316 KRT86O43790 486 aa10.27□□□□□ -0.77
CAPN3-204ENST00000356316 CBSLP0DN79 551 aa10.27□□□□□ -0.77
CAPN3-204ENST00000356316 CD9P21926 228 aa10.27□□□□□ -0.77
CAPN3-204ENST00000356316 GNLYP22749 145 aa10.27□□□□□ -0.77
CAPN3-204ENST00000356316 CCR7P32248 378 aa10.27□□□□□ -0.77
CAPN3-204ENST00000356316 CBSP35520 551 aa10.27□□□□□ -0.77
CAPN3-204ENST00000356316 ARSFP54793 590 aa10.27□□□□□ -0.77
CAPN3-204ENST00000356316 RAPSNQ13702 412 aa10.27□□□□□ -0.77
CAPN3-204ENST00000356316 ATP1A4Q13733 1029 aa10.27□□□□□ -0.77
CAPN3-204ENST00000356316 TMED2Q15363 201 aa10.27□□□□□ -0.77
CAPN3-204ENST00000356316 RPS6KA1Q15418 735 aa10.27□□□□□ -0.77
CAPN3-204ENST00000356316 SF1Q15637 639 aaKnown RBP10.27□□□□□ -0.77
CAPN3-204ENST00000356316 INPP5JQ15735 1006 aaPredicted RBP10.27□□□□□ -0.77
CAPN3-204ENST00000356316 DEFB110Q30KQ9 67 aa10.27□□□□□ -0.77
CAPN3-204ENST00000356316 ZC3H12BQ5HYM0 836 aaKnown RBP10.27□□□□□ -0.77
CAPN3-204ENST00000356316 PCID2Q5JVF3 399 aa10.27□□□□□ -0.77
CAPN3-204ENST00000356316 PTRHD1Q6GMV3 140 aaKnown RBP10.27□□□□□ -0.77
CAPN3-204ENST00000356316 C4orf22Q6V702 233 aa10.27□□□□□ -0.77
CAPN3-204ENST00000356316 MICALCLQ6ZW33 695 aa10.27□□□□□ -0.77
CAPN3-204ENST00000356316 GSTA5Q7RTV2 222 aa10.27□□□□□ -0.77
CAPN3-204ENST00000356316 SLC13A5Q86YT5 568 aaPredicted RBP10.27□□□□□ -0.77
CAPN3-204ENST00000356316 SKA2Q8WVK7 121 aaPredicted RBP10.27□□□□□ -0.77
CAPN3-204ENST00000356316 C1orf54Q8WWF1 131 aa10.27□□□□□ -0.77
CAPN3-204ENST00000356316 DLG3Q92796 817 aa10.27□□□□□ -0.77
CAPN3-204ENST00000356316 PNPLA2Q96AD5 504 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms