RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 IL18R1Q13478 541 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 RUNDC3AQ59EK9 446 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 ZDHHC21Q8IVQ6 265 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 LIX1Q8N485 282 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 C2orf69Q8N8R5 385 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 SLC39A13Q96H72 371 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 KAT8Q9H7Z6 458 aaKnown RBP17.41■□□□□ 0.38
VHL-202ENST00000345392 IPPKQ9H8X2 491 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 CPNE5Q9HCH3 593 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 TMEM45AQ9NWC5 275 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 ABCG2Q9UNQ0 655 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 IFT52Q9Y366 437 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 NUP214P35658 2090 aaPredicted RBP17.41■□□□□ 0.38
VHL-202ENST00000345392 COL4A4P53420 1690 aaPredicted RBP17.41■□□□□ 0.38
VHL-202ENST00000345392 E5RI56 91 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 H0Y626 953 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 NUAK1O60285 661 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 TRIM16O95361 564 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 ZNF682O95780 498 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 ITGAMP11215 1152 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 BMPR1AP36894 532 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 CLK1P49759 484 aaKnown RBP17.41■□□□□ 0.38
VHL-202ENST00000345392 GTF2H2Q13888 395 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 RFX4Q33E94 735 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 SLC39A12Q504Y0 691 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 GTF2H2CQ6P1K8 395 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 AHSA2Q719I0 299 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 ANKRD46Q86W74 232 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 SETD9Q8NE22 299 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 OR52E6Q96RD3 313 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.41■□□□□ 0.38
VHL-202ENST00000345392 IL37Q9NZH6 218 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 OPTCQ9UBM4 332 aa17.41■□□□□ 0.38
VHL-202ENST00000345392 IFRD1O00458 451 aaPredicted RBP17.4■□□□□ 0.38
VHL-202ENST00000345392 PGLSO95336 258 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 GRK4P32298 578 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 TGFBR2P37173 567 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 GDF5P43026 501 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 CDC20Q12834 499 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 MAP2K5Q13163 448 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 ZC3H12BQ5HYM0 836 aaKnown RBP17.4■□□□□ 0.38
VHL-202ENST00000345392 AFTPHQ6ULP2 937 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 GALNT10Q86SR1 603 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 FAM120BQ96EK7 910 aaKnown RBP17.4■□□□□ 0.38
VHL-202ENST00000345392 PYURFQ96I23 114 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 PARK7Q99497 189 aaKnown RBP17.4■□□□□ 0.38
VHL-202ENST00000345392 TP63Q9H3D4 680 aaPredicted RBP17.4■□□□□ 0.38
VHL-202ENST00000345392 SP140LQ9H930 580 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 FNIP2Q9P278 1114 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 FKBPLQ9UIM3 349 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 CAB39Q9Y376 341 aaPredicted RBP17.4■□□□□ 0.38
VHL-202ENST00000345392 TRPV2Q9Y5S1 764 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 ANKRD36A6QL64 1941 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 A0A0D9SEW6 157 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 B4GALT3O60512 393 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 HSPA7P48741 367 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 ZRANB3Q5FWF4 1079 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 DESI1Q6ICB0 168 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 RNF19BQ6ZMZ0 732 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 SVOPQ8N4V2 548 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 TTC9BQ8N6N2 239 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 TXNDC15Q96J42 360 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 CCL27Q9Y4X3 112 aa17.4■□□□□ 0.38
VHL-202ENST00000345392 PER2O15055 1255 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 ASNA1O43681 348 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 RETP07949 1114 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 KRT20P35900 424 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 LIPAP38571 399 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 RGRP47804 291 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 NEK2P51955 445 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 GNASQ5JWF2 1037 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 SHQ1Q6PI26 577 aaKnown RBP17.39■□□□□ 0.37
VHL-202ENST00000345392 SUSD1Q6UWL2 747 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 PSD4Q8NDX1 1056 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 FATE1Q969F0 183 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 MTFMTQ96DP5 389 aaKnown RBP17.39■□□□□ 0.37
VHL-202ENST00000345392 NDEL1Q9GZM8 345 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 NSUN3Q9H649 340 aaKnown RBP17.39■□□□□ 0.37
VHL-202ENST00000345392 MARCH7Q9H992 704 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 EIF3LQ9Y262 564 aaKnown RBP17.39■□□□□ 0.37
VHL-202ENST00000345392 TMEM98Q9Y2Y6 226 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 LAMA2P24043 3122 aaKnown RBP17.39■□□□□ 0.37
VHL-202ENST00000345392 hCG_2039718K7EN88 272 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 AREL1O15033 823 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 EPOP01588 193 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 C1QCP02747 245 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 NTRK1P04629 796 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 DBTP11182 482 aaKnown RBP17.39■□□□□ 0.37
VHL-202ENST00000345392 MC4RP32245 332 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 NRIP1P48552 1158 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 ZNF404Q494X3 552 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 PRSS36Q5K4E3 855 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 CAPN13Q6MZZ7 669 aaPredicted RBP17.39■□□□□ 0.37
VHL-202ENST00000345392 SYTL1Q8IYJ3 562 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 CFAP52Q8N1V2 620 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 TTC29Q8NA56 475 aaPredicted RBP17.39■□□□□ 0.37
VHL-202ENST00000345392 TRIB3Q96RU7 358 aa17.39■□□□□ 0.37
VHL-202ENST00000345392 SEC22BO75396 215 aa17.38■□□□□ 0.37
VHL-202ENST00000345392 PHC1P78364 1004 aa17.38■□□□□ 0.37
VHL-202ENST00000345392 HTRA3P83110 453 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms