RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 OAS1P00973 400 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 CASRP41180 1078 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 PRPF19Q9UMS4 504 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 TK2O00142 265 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 CYP17A1P05093 508 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 POLR2CP19387 275 aaPredicted RBP16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 GRIA1P42261 906 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 CDC42P60953 191 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 SEMA3AQ14563 771 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 ZBTB6Q15916 424 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 SVOPQ8N4V2 548 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 ZSCAN1Q8NBB4 408 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 CHST14Q8NCH0 376 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 RGMAQ96B86 450 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 RCN3Q96D15 328 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 CYTH4Q9UIA0 394 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 LRP5O75197 1615 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 SHMT2P34897 504 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 SLC26A3P40879 764 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 SRSF11Q05519 484 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 UBAP2LQ14157 1087 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 SLBPQ14493 270 aaKnown RBP eCLIP16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 PARM1Q6UWI2 310 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 MR1Q95460 341 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 SLC38A2Q96QD8 506 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 TMEM27Q9HBJ8 222 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 TPRKBQ9Y3C4 175 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 AP4S1Q9Y587 144 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 A8MUI8 341 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 IL12BP29460 328 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 GRIA3P42263 894 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 HERVK_113P63132 956 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 GSTM4Q03013 218 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 GCNT6Q5T4J0 391 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 NIPAL1Q6NVV3 410 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 XAGE5Q8WWM1 108 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 CMTM7Q96FZ5 175 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 TMEM79Q9BSE2 394 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 ERVK-6Q9BXR3 956 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 MYH11P35749 1972 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 ABCA3Q99758 1704 aa16.05■□□□□ 0.16
SMARCA4-201ENST00000344626 FAM221BA6H8Z2 402 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 PGDP52209 483 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 UGT2B15P54855 530 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 TAS2R41P59536 307 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 GLB1L3Q8NCI6 653 aaPredicted RBP16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 ZBED6CLQ96FA7 236 aaPredicted RBP16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 RTKNQ9BST9 563 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 KCNK12Q9HB15 430 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 SLCO1B3Q9NPD5 702 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 SAMD4AQ9UPU9 718 aaKnown RBP16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 KCTD3Q9Y597 815 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 DGKBQ9Y6T7 804 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 PFDN1O60925 122 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 TFPIP10646 304 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 HOXD8P13378 290 aaPredicted RBP16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 IMPDH1P20839 514 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 KCNC3Q14003 757 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 DPYSQ14117 519 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 DPY19L1Q2PZI1 675 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 CDC73Q6P1J9 531 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 GALNT18Q6P9A2 607 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 CPXM2Q8N436 756 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 GLYATL1Q969I3 302 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 ZDHHC12Q96GR4 267 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 HCN2Q9UL51 889 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 N6AMT1Q9Y5N5 214 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 FAM159BA6NKW6 160 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 SLC25A3Q00325 362 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 ARHGAP40Q5TG30 622 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 CLEC6AQ6EIG7 209 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 TYW3Q6IPR3 259 aaKnown RBP16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 NCEH1Q6PIU2 408 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 OR2T12Q8NG77 320 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 HBEGFQ99075 208 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 GATA5Q9BWX5 397 aaPredicted RBP16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 WDR55Q9H6Y2 383 aaPredicted RBP16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 A8MUA0 341 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 CXCL10P02778 98 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 FAM109BQ6ICB4 259 aaPredicted RBP16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 GAREM2Q75VX8 874 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 ULK2Q8IYT8 1036 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 KCT2Q8NC54 265 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 DNASE1L2Q92874 299 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 RPRD1BQ9NQG5 326 aaKnown RBP16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 SEC14L3Q9UDX4 400 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 SLC2A6Q9UGQ3 507 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 BRWD3Q6RI45 1802 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 TCRBV7S3A2A0A539 114 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 MCIDASD6RGH6 385 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 GMFGO60234 142 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 SLC34A1Q06495 639 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 TMEM31Q5JXX7 168 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 HTR3DQ70Z44 454 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 EPHX4Q8IUS5 362 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 RASSF5Q8WWW0 418 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 TAC3Q9UHF0 121 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 OR1A2Q9Y585 309 aa16.04■□□□□ 0.16
SMARCA4-201ENST00000344626 MAGEA13PA6NCF6 341 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 CLOCKO15516 846 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms