RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 TTC7BQ86TV6 843 aa13.2□□□□□ -0.3
HERPUD1-202ENST00000344114 CPNE9Q8IYJ1 553 aa13.2□□□□□ -0.3
HERPUD1-202ENST00000344114 NRSN1Q8IZ57 195 aa13.2□□□□□ -0.3
HERPUD1-202ENST00000344114 TRAM1L1Q8N609 369 aa13.2□□□□□ -0.3
HERPUD1-202ENST00000344114 FAR2Q96K12 515 aa13.2□□□□□ -0.3
HERPUD1-202ENST00000344114 SLC30A3Q99726 388 aa13.2□□□□□ -0.3
HERPUD1-202ENST00000344114 TUBB6Q9BUF5 446 aa13.2□□□□□ -0.3
HERPUD1-202ENST00000344114 ZSCAN5AQ9BUG6 496 aa13.2□□□□□ -0.3
HERPUD1-202ENST00000344114 BOCQ9BWV1 1114 aa13.2□□□□□ -0.3
HERPUD1-202ENST00000344114 SPATA16Q9BXB7 569 aa13.2□□□□□ -0.3
HERPUD1-202ENST00000344114 ERVK-6Q9BXR3 956 aa13.2□□□□□ -0.3
HERPUD1-202ENST00000344114 FAM83DQ9H4H8 585 aa13.2□□□□□ -0.3
HERPUD1-202ENST00000344114 CYP4F12Q9HCS2 524 aa13.2□□□□□ -0.3
HERPUD1-202ENST00000344114 PREBQ9HCU5 417 aa13.2□□□□□ -0.3
HERPUD1-202ENST00000344114 SARS2Q9NP81 518 aaKnown RBP13.2□□□□□ -0.3
HERPUD1-202ENST00000344114 LATS2Q9NRM7 1088 aa13.2□□□□□ -0.3
HERPUD1-202ENST00000344114 U3KQA8 63 aa13.2□□□□□ -0.3
HERPUD1-202ENST00000344114 NPEPPSL1A6NEC2 478 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 SUPT3HB4E1H0 165 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 CFAP99D6REC4 459 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 ANKRD65E5RJM6 399 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 STX16-NPEPL1H3BU86 382 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 MYO1CO00159 1063 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 EIF3FO00303 357 aaPredicted RBP13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 BTN3A1O00481 513 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 FCHO1O14526 889 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 ZNF195O14628 629 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 STX16O14662 325 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 HGSO14964 777 aaPredicted RBP13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 HDAC3O15379 428 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 KLK10O43240 276 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 SUPT3HO75486 399 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 PIAS2O75928 621 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 UNC5CO95185 931 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 SERPINA6P08185 405 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 OR56A5P0C7T3 313 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 CA5AP35218 305 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 TAS2R38P59533 333 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 NCALDP61601 193 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 CNTN1Q12860 1018 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 TSNQ15631 228 aaKnown RBP13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 ZNF284Q2VY69 593 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 FAM46CQ5VWP2 391 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 SEL1L3Q68CR1 1132 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 LIPIQ6XZB0 460 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 MAVSQ7Z434 540 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 HSD11B1LQ7Z5J1 315 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 TECPR1Q7Z6L1 1165 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 ADAMTSL2Q86TH1 951 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 FBXO39Q8N4B4 442 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 EXT2Q93063 718 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 ARRDC3Q96B67 414 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 MED8Q96G25 268 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 APOLD1Q96LR9 279 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 RILPQ96NA2 401 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 GSTO2Q9H4Y5 243 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 DYRK4Q9NR20 520 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 THSD1Q9NS62 852 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 SPATS2LQ9NUQ6 558 aaKnown RBP13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 NLGN3Q9NZ94 848 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 NUDT4Q9NZJ9 180 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 GALPQ9UBC7 116 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 PPM1HQ9ULR3 514 aa13.19□□□□□ -0.3
HERPUD1-202ENST00000344114 CFAP73A6NFT4 308 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 K7ENP7 123 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 UBXN8O00124 270 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 MATN2O00339 956 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 QSOX1O00391 747 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 FFAR2O15552 330 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 KLK8O60259 260 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 WISP1O95388 367 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 CBSLP0DN79 551 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 ALPPL2P10696 532 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 MTHFD2P13995 350 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 GFAPP14136 432 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 CBSP35520 551 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 LIG3P49916 1009 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 IDH3AP50213 366 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 RASSF2P50749 326 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 KCNC4Q03721 635 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 TUBB3Q13509 450 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 KRT72Q14CN4 511 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 POM121L1PQ3SYA9 428 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 GPRC6AQ5T6X5 926 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 NEK5Q6P3R8 708 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 INO80CQ6PI98 192 aaPredicted RBP13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 EPGNQ6UW88 154 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 RFLNAQ6ZTI6 216 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 ZNF765Q7L2R6 523 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 MYO1HQ8N1T3 1032 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 ZBTB2Q8N680 514 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 PTGR2Q8N8N7 351 aaPredicted RBP13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 DDHD1Q8NEL9 900 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 LKAAEAR1Q8TD35 194 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 EEF1AKMT1Q8WVE0 214 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 FUBP1Q96AE4 644 aaKnown RBP13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 RAB7BQ96AH8 199 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 PHF21BQ96EK2 531 aa13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 CCDC97Q96F63 343 aaPredicted RBP13.18□□□□□ -0.3
HERPUD1-202ENST00000344114 VPS35Q96QK1 796 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms