RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 DDX5P17844 614 aaKnown RBP12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 RPS12P25398 132 aaKnown RBP12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 CDKN2DP55273 166 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 TUBA1BP68363 451 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 CCL15Q16663 113 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 SIRPB2Q5JXA9 342 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 FAM171A1Q5VUB5 890 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 CYP4V2Q6ZWL3 525 aaPredicted RBP12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 TUBA1AQ71U36 451 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 SLC38A4Q969I6 547 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 SNX27Q96L92 541 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 ALPK1Q96QP1 1244 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 MTERF1Q99551 399 aaKnown RBP12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 CLIC1O00299 241 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 DCKP27707 260 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 HTR2BP41595 481 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 BCL2L1Q07817 233 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 ZNF648Q5T619 568 aaPredicted RBP12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 SPATC1Q76KD6 591 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 DENND1CQ8IV53 801 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 FAM217AQ8IXS0 508 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 CYP4Z2PQ8N1L4 340 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 NTAN1Q96AB6 310 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 PYURFQ96I23 114 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 DYRK1BQ9Y463 629 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 ADAM23O75077 832 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 TBX18O95935 607 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 PPP2R1BP30154 601 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 UGT2B15P54855 530 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 MFSD10Q14728 455 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 UAP1L1Q3KQV9 507 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 HMBOX1Q6NT76 420 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 MZT2AQ6P582 158 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 CRYBG2Q8N1P7 616 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 OR4A15Q8NGL6 344 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 RASSF5Q8WWW0 418 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 TP53INP1Q96A56 240 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 PCYT2Q99447 389 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 CCDC177Q9NQR7 707 aaPredicted RBP12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 MKLN1Q9UL63 735 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 GSAPA4D1B5 854 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 MAGEB17A8MXT2 336 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 GTDC1Q4AE62 458 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 AKIRIN2Q53H80 203 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 RASSF6Q6ZTQ3 369 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 LAPTM4BQ86VI4 370 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 OSTM1Q86WC4 334 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 CLDN19Q8N6F1 224 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 ATAD1Q8NBU5 361 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 C11orf65Q8NCR3 313 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 BRSK1Q8TDC3 778 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 COPS8Q99627 209 aa12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 NSUN3Q9H649 340 aaKnown RBP12.28□□□□□ -0.44
SSX2IP-201ENST00000342203 NRCAMQ92823 1304 aa12.27□□□□□ -0.44
SSX2IP-201ENST00000342203 FAM172BPA6NC97 362 aa12.27□□□□□ -0.44
SSX2IP-201ENST00000342203 CKMP06732 381 aa12.27□□□□□ -0.44
SSX2IP-201ENST00000342203 STSP08842 583 aa12.27□□□□□ -0.44
SSX2IP-201ENST00000342203 HTR1EP28566 365 aa12.27□□□□□ -0.44
SSX2IP-201ENST00000342203 CD300CQ08708 224 aa12.27□□□□□ -0.44
SSX2IP-201ENST00000342203 CAMK2GQ13555 558 aaPredicted RBP12.27□□□□□ -0.44
SSX2IP-201ENST00000342203 BTBD16Q32M84 506 aa12.27□□□□□ -0.44
SSX2IP-201ENST00000342203 CYP27C1Q4G0S4 372 aa12.27□□□□□ -0.44
SSX2IP-201ENST00000342203 LSMEM2Q8N112 164 aa12.27□□□□□ -0.44
SSX2IP-201ENST00000342203 LGI4Q8N135 537 aa12.27□□□□□ -0.44
SSX2IP-201ENST00000342203 PRDM8Q9NQV8 689 aa12.27□□□□□ -0.44
SSX2IP-201ENST00000342203 SPIN1Q9Y657 262 aaPredicted RBP12.27□□□□□ -0.44
SSX2IP-201ENST00000342203 ARID1BQ8NFD5 2236 aaPredicted RBP12.27□□□□□ -0.44
SSX2IP-201ENST00000342203 UPK3BL1B0FP48 263 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 UPK3BL2E5RIL1 263 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 OR56A5P0C7T3 313 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 DARSP14868 501 aaKnown RBP12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 GADD45AP24522 165 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 CD40LGP29965 261 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 CD68P34810 354 aaPredicted RBP12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 ACLYP53396 1101 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 KRTCAP2Q8N6L1 136 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 OR52B6Q8NGF0 335 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 FAM110BQ8TC76 370 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 GANCQ8TET4 914 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 KAT2AQ92830 837 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 FRMD6Q96NE9 622 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 TRIT1Q9H3H1 467 aaKnown RBP12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 MFSD1Q9H3U5 465 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 MCUBQ9NWR8 336 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 TVP23BQ9NYZ1 205 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 LSM7Q9UK45 103 aaKnown RBP12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 RAI2Q9Y5P3 530 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 CLDN9O95484 217 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 SMIM10L2AP0DMW4 78 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 SMIM10L2BP0DMW5 78 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 C7P10643 843 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 HTR1BP28222 390 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 WEE1P30291 646 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 RPP38P78345 283 aaKnown RBP12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 ST3GAL4Q11206 333 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 KIAA1614Q5VZ46 1190 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 LBX2Q6XYB7 198 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 SH2D5Q6ZV89 423 aa12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 UBE2R2Q712K3 238 aaPredicted RBP12.27□□□□□ -0.45
SSX2IP-201ENST00000342203 SYVN1Q86TM6 617 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms